Adelges cooleyi (spruce gall adelgid): 126834200
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Entry
126834200 CDS
T09500
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126834200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126834200
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126834200
mRNA degradation factors
3'-5' decay
Pan complex
126834200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
126834200
NCBI-ProteinID:
XP_050421914
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MDPMAMIGPQYNNLMQNGPPEESKLATYMKRQNNGSPQSALFQSLSKNLSNLEVNQSMKK
ASISTVDFVPRNLVSSLNIPDGSSLYAKEKSQAIQAYQKNVNGTTYFYPPDTNGTNSVNN
TIYDDTSGYLSMPPSVESPTAGLYAQDDLRRDLLHRNSLSIASPDSNQWPDLPESIEDYH
EVYPLDNYGHSSKITTFNTSTYRATNSKTGDKCCLKRIHGFRQPITKLSPLVEAWKKISH
ANIVQLKDVFTTKAFNDSSLIFAYNYHADSDTLQIRHFNTHETMNGYNDPFSSDPNAPRP
YSHTKNAILRHQHSNGLLSESTLWNYAIQLSGALRVIHGSGLALRGLEMNRVLVTGTVNS
RARLRINCVAIMDVLMNDMATSNIISHFQQEDLTDFGKLLLALACRSLIAVHPDNLATSI
ELMARTYSSDIRNLIRYLLSSQRRHITELMPMIGARFYTQLDAVQNHSDTLENELSKEME
NGRLFRLLVKLGSINERPEFNLDPSWSETGDRYMLKLFRDYLFHQVTEDGRPWLDMAHIV
QTLNKLDAGSTDTICLYSRDEKTILVVSYQELKQCLEQSFCEIASVAASEDNIKAE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatggctatgatcggaccgcagtacaataatttaatgcagaatggtcctcca
gaagaatcaaaactcgctacttacatgaaacgtcaaaataatggatctcctcaatcggcc
ttattccaatctttatcaaaaaacctctcaaatttagaagtaaaccaatcaatgaaaaag
gcgtccatatcgacggttgatttcgtacctagaaatctagttagttcgttaaatattcct
gacggttcctcgttgtatgctaaagaaaaatctcaggcaatacaagcataccagaaaaac
gtcaacggcaccacgtatttttatcctccggacacgaacggtacaaattcagttaacaat
accatttatgacgatacttctggctacttatcgatgccaccgtctgtggaatcgccgact
gctggactgtacgcacaggacgacctcagaagagatttattgcatagaaactcgctgtcg
atagcatcccccgattctaatcaatggccagatttaccagaaagtatcgaagactatcat
gaagtgtatcctttggataactacggccactcgtcaaaaataacgacattcaatacttcc
acgtatcgagcgacaaattctaaaaccggcgacaaatgttgcttgaagcgtatacacggt
tttcggcaaccaattacaaagctcagtccgctggtggaagcttggaagaaaatcagccac
gctaatatagttcaattaaaggacgtgtttacgacgaaagctttcaacgatagctcatta
atattcgcctataattatcatgcggattccgatacgttgcaaatcagacactttaacact
cacgagacaatgaatgggtacaacgatccgtttagttcggatccgaatgcaccgaggcca
tacagtcatacgaaaaacgcaattttacgccatcagcatagtaatggactgttgtcggaa
agtacattgtggaattacgctatacagttgagtggcgcactaagagtaattcatggatct
ggtttagcgttacgaggcctcgaaatgaacagagtcctggtgaccggcaccgtcaactcc
agggcaaggctgagaatcaattgtgttgccataatggacgttttaatgaacgacatggcc
acttcgaatataataagccattttcaacaagaagatttaacagactttggcaaattacta
ttagcgttggcttgccgatcgctaatagccgttcatcctgataatttagctacttccatt
gaactaatggctcgtacttatagtagtgatattcgtaatttgataaggtatttactgagc
agtcaaagaagacacattacagaattaatgccgatgattggtgcgcgattttacacgcaa
ctagacgctgtgcaaaatcactcggacacgttagaaaacgaattgtccaaagaaatggaa
aacggacgtcttttccggttgttggtgaaacttggatcgataaatgagcggccagaattt
aacctagacccgtcttggtcagaaaccggcgatcgctacatgctgaagttattccgagat
tacttgttccatcaagtgacagaagacggtcgtccgtggttggatatggctcatatcgta
cagaccctcaataaacttgacgctggatcgacggacactatttgtttgtattctcgcgac
gaaaagactattttggttgttagctaccaagagttgaaacagtgtttagaacagtcgttt
tgcgagatcgcttcggtagctgcatccgaagataacataaaggctgaataa
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