Adelges cooleyi (spruce gall adelgid): 126836255
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Entry
126836255 CDS
T09500
Name
(RefSeq) collagen alpha-1(IX) chain-like isoform X1
KO
K08131
collagen type IX alpha
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo04512
ECM-receptor interaction
acoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126836255
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126836255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
acoo00535
]
126836255
Proteoglycans [BR:
acoo00535
]
Extracellular matrix (ECM) proteoglycans
Others
126836255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
126836255
NCBI-ProteinID:
XP_050425458
EnsemblRapid:
LOC126836255
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MVHFVENFLRWCQIILVGMVIIPTDVLAFSTNETSKINPSDYSDYDDGQEGTVRSMIKDR
DNLEPCGDFRPGEDDLQITDFIRKFRLDTAEEIMKKRITKVQGSNRFQTAYRVEKAAQLV
MSTRELFPLGIPQQFSFIVTYNSKLLMATHWHVLRITDYQNTTSMQITVNKATRNVEFSI
VNYDGYLQTVTFEANNIFDSNWHKLHFGVFYERVVLYIDCKQVGVKILEPRGTVDIFGNT
ALATVTDFQAAPVDLQWVTLSCDPTKPQREGCAELHQILEESQTQPSLKPSKCAAAQESS
KCSKTLQIVGPPGPQGTPGTQGPTGPQGPPGLPGPEGPRGYQGLPGSPGIPALPGQHGEK
GDPGEPGAPGQRGEAGPPGITTYLPGPPEYIRPGTFGGVKGERGDQGLPGLPGKSFSEIE
IKDICLVVLKEQLSELTTTLVGPPGPPGRSIIGKPGPPGVQGSPGEPGPPGLGIPGERGF
PGSPGLQGSAGPEGPAGQKGDKGDRGTEAVAYEGPPGPPGQPGPTGSHGRPGDRGEPGRP
GPVGPRGYPGTQGSPGYCEMCNNVYYAARPLPAGNFKGP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggttcattttgtcgaaaacttcttaagatggtgccaaataattttagttggtatggtt
attatcccgaccgatgttttggcgttttccacaaacgaaacgagtaaaatcaatcctagt
gactactcagattatgacgacggacaagagggcacagtgagatcgatgatcaaggaccgc
gataatttggagccgtgtggcgattttcggccgggagaagatgatttgcaaataacagat
ttcattagaaaattcagattagacacggccgaagaaattatgaaaaaaagaattaccaaa
gtgcaaggatccaataggtttcaaactgcttacagagtggaaaaagcggcacaactagtt
atgtccacaagggaactatttcccctgggcatcccgcagcaattttcttttattgtcacc
tacaactcaaaactgttgatggctacgcattggcacgtactccggattaccgactaccaa
aatacgactagtatgcaaataaccgtcaataaggctacaagaaacgtagagttttcgatt
gtaaattatgacggatatctacaaactgttacatttgaagcgaataatatttttgatagc
aattggcacaagctacatttcggtgtgttctacgaacgagtagttctgtacatagattgc
aaacaagtcggagtaaaaattttggaacccaggggtacggtggatatctttggaaatacc
gccttggcgacggttaccgatttccaagcggccccagtagacttgcaatgggttaccctc
agttgcgatccgaccaaacctcagagggaaggttgtgcggaacttcatcagattttggaa
gaatctcaaacgcagccatcactaaaacctagtaaatgcgcagccgctcaagaaagcagc
aaatgctccaaaacattacaaattgtgggaccaccgggacctcaagggacaccaggaaca
caaggaccaacaggcccacaggggcctcctggattgccgggacctgaaggtccacgagga
tatcaaggtttacctggtagcccaggtataccagcattacctggtcaacatggcgaaaag
ggggacccgggagaacctggtgccccgggtcaaagaggcgaagccggacctccgggaatt
acaacttatctgccggggccaccagaatacataagacccggaacttttggcggtgttaaa
ggagagcgaggtgaccaaggattaccaggactacccggtaaaagtttttcagaaatcgag
attaaagatatttgtctagtggtactcaaagaacaactttcagaacttactaccacttta
gtaggtccacccggacctcctggtcgatcgattataggaaaacctggaccacctggtgtg
cagggttctccaggtgaaccaggaccacctggtttaggaatacctggggaacgtggtttt
ccagggtctccaggtctacagggctcagcaggtcccgaaggtccagcaggacagaaaggc
gataaaggtgatagagggacggaagctgttgcttatgaaggaccacccgggccacctgga
caaccagggcctactgggtcacacggcaggccaggcgatagaggagaacccggaagacca
ggtccagtgggtccaagaggttacccaggaactcaaggttcaccaggatattgtgaaatg
tgtaataatgtatattatgcagcaagacctctcccagctggaaatttcaaagggccttaa
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