Adelges cooleyi (spruce gall adelgid): 126836389
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Entry
126836389 CDS
T09500
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo04382
Cornified envelope formation
acoo04512
ECM-receptor interaction
acoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126836389
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126836389
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126836389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoo04147
]
126836389
00536 Glycosaminoglycan binding proteins [BR:
acoo00536
]
126836389
Exosome [BR:
acoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126836389
Glycosaminoglycan binding proteins [BR:
acoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126836389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126836389
NCBI-ProteinID:
XP_050425687
LinkDB
All DBs
Position
Unknown
AA seq
1777 aa
AA seq
DB search
MPRLRLLHWRLFALFVCYFSSTTSQWAPNVYDTNQTNVYDPYSEQDVKRFNSENRYGVSN
QRGNSSNCIPKCFAEKGSRGPPGTPGLPGPPGMLGFQGIEGLPGPMGDKGDIGPLGPRGP
KGDRGKMGMPGFPGINGIPGQIGPAGLPGIPGLDGCNGTDGKPGLPGLEGPPGPRGYSGI
PGEKGLKGEPAHTSINNKGQKGEPGLDGIQGIPGSPGSPGPIGPLGPQGDVGLKGNRGFV
GPKGEKGNMGIAYEGQKGDKGFKGERGPPGPPVSYFDPANGTVVGPKGEPGEKGYSGEPG
PPGLKGEPGLIGDPGIPGDVGVKGEKGLQGPPGIRGRDGYPGPPGPVGLKGDRGSEGLPG
LPGRSGLKGEPGRDGPAGAIGLRGPPGPPGGGKGRPGPPGPQGPRGYPGQPGPKGLDGID
GTQGPPGPIGYPGGQGIPGSPGPEGLAGDKGAKGEPGLTGFPGEPGPRGYNGVQGPPGPR
GFAGEKGSSIIGPKGLDGRDGKDGERGDKGERGYQGERGSPGDSPTGIVGPQGVMGPPGE
KGADGRHGIPGIPGRDGPKGDIGGRCLGCRPGDKGGKGEPGLYGNPGIMGPRGQPGERGF
PGEPGADGLIGPPGQIGAPGSDGINGEPGVPGDKGEPALVPENIVLDRKGEAGPRGDPGR
EGLPGPLGLQGPTGPQGIEGTPGQPGEKGDAGFPGSEGIPGQPGHPGTKGEKGISIKGHQ
GYPGIPGADGLKGDPGRIGSKGEPGHCEVMDLIKGVKGEPGNQGQKGEPGPPGTDGEPGD
KGFTGPSGPTGTPGPRGIPGPVGPRGLPGPRGEKGNTGSMGFPGEAGRDGERGFPGMPAP
KGVKGEPGIPVLGPKGSIGPSGEKGEKGLQGPFGRPGVSGEPGLPGLPGVKGDQGEPGLE
GLTGQLGPKGEPGPIGPIGPKGFDGQPGADGQKGEPGLTGEPGRPGLQGFPGPKGDTGLP
GPEGPKGFPGYRGFAGLPGAPGMDGIPGQKGDKGDSGLPGLPGISGNEGLPGLTGERGDK
GDVGFPGPPGAFGIRGPTGPKGDRGPIGFQGVKGEPGPVSEKGQKGEPGESGLRGPQGLP
GLDGISGEKGDMGFPGIGLQGWPGPKGDAGTPGFNGQPGVDGDKGVPGVPGVQGMKGDIG
PRGLPGIPGPPGMDGLNGLEGSPGYPGVPGIKGDKGDVGYPGRPGLDGMKGERGLPGLTG
PIGLPGPIGDKGDRGLPGPAVDIKGDKGEPGPPGLGGLPGLPGPPGLEGFPGLQGDKGDM
GIAGPRGYAGPPGPKGDKGEIGYQGQPGLPGFTVKGEKGLPGLLGKHGRDGTPGLQGEKG
DKGLPGLPGLPGAGGPAGLPGPPGDMGPIGPPGFIGPPGVDGLPGAPGSDGIPGSLGPKG
EPGLPAPYAEKGDKGDSGPPGLPGYPGSKGDKGDRGFPGIPGLPGIEGLPGEKGLSGFPG
KPGSPGFSGPKGDKGEAGYSPPPGPKGERGLPGPPGWPGEKGDRGLDGLPGVRGIKGERG
IPGLEGPVGPPGLDGDKGEPGLEGLPGLQGAPGHSGNDGLPGRACETQPDYSTGILLVKH
SQSSTIPKCEGNHVKLWDGYSLLYIEGNEKSHNQDLGFAGSCIRKFSTMPFLFCDFNNVC
NYASRNDKSYWLSTNAPLPMMPVEEFEIKNYISRCVVCEAPANVIAVHSQALTVPDCPNG
WEGLWIGFSFVMHTAAGAEGGGQSLASPGSCLEDFRATPFIECNGARGTCHYFANKLSFW
LATIDPDEQFTSPQRQTLKKDMTRSRISRCQVCIRRT
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggcttagactgctccattggcggcttttcgctttgttcgtctgctatttttcg
tcgacgacctcgcaatgggctccaaatgtgtatgatacaaaccaaactaacgtatacgac
ccgtattcagaacaggatgttaaaagatttaacagcgaaaaccggtacggtgtttccaat
caaagaggaaattcgtccaactgcataccaaaatgttttgcggaaaaaggaagcagagga
cctccaggtacacccggattaccgggccctccaggaatgttgggattccaaggaatcgaa
ggacttccaggtcctatgggagacaagggagacatcggtcctttagggccacgtggtcct
aagggagatagaggcaaaatgggcatgccaggattcccaggtatcaatggtataccggga
caaataggaccagcaggattgccaggtattccaggtctagacggttgtaacggaactgat
ggtaaaccaggtcttcccggattagaaggcccaccgggcccccgcgggtattccggtatc
ccgggagaaaaaggtctcaaaggagaacccgctcatacatctataaacaacaaaggacaa
aagggagaacccggtttggatggtattcaaggtatacccggaagtcccggtagcccaggg
ccaataggaccgctaggaccacaaggtgatgtgggattgaagggaaatagaggttttgtt
ggaccaaaaggagagaaaggaaacatgggaattgcttacgaaggccaaaaaggagataaa
ggttttaagggagaacgtggtccccctggacctcccgtgtcatattttgatccagctaac
ggtacagtagtcggacccaaaggcgaacccggcgaaaaaggctattcgggcgaacctgga
ccacctggtcttaaaggagaaccgggactgatcggtgacccaggaataccaggggacgtt
ggagttaaaggagaaaaggggttgcaaggaccacccggtataaggggtcgagatggatat
ccaggaccacctggaccggttggtttgaaaggtgacagaggaagtgaaggattgcccgga
ttaccaggtcggtctggacttaaaggagaaccagggagagacggcccagcaggagcaatt
ggactgcgaggtcctccgggacccccgggaggcggaaaaggtagaccaggtccgccaggc
cctcaaggaccgcgaggttatcctggacaacctggccctaaaggtttagatggcattgat
ggcactcaaggtcctccgggacctattggttacccaggaggtcaaggaatacctggatcg
ccaggtcctgaaggactggctggcgataaaggagcaaaaggagaacctggtctaacaggt
ttccccggagaacccggtccaagaggttacaatggcgtacagggaccaccaggaccacgc
ggttttgcaggggagaagggatcttcgattataggacctaaaggattagatggtcgtgac
ggcaaagacggtgaaaggggagataagggcgaacgtggttatcaaggtgaacgtggatct
ccaggtgattcccctactggtattgttggaccacagggcgtcatgggacctccaggagaa
aaaggagcagacggtagacacggaatacccggtatcccaggtcgagacggtcccaaaggt
gacattggcggccgttgcttgggctgtcgtccaggagacaaaggaggcaaaggagaaccc
ggcttgtatggaaatccaggaataatgggacctcgaggacaacctggcgaaagaggattc
ccgggcgaacccggtgctgatggattaattggacctccaggtcaaattggtgcacctggc
tccgatggtattaacggggaacccggagtgcctggtgacaaaggggagcctgctttagtg
ccggagaacatagtactagacaggaaaggagaagctggaccgagaggagatccaggaaga
gaaggactaccaggtccacttgggcttcaaggacctacaggaccacaaggcatagaagga
acacctggtcaacctggtgagaaaggtgatgccggattcccaggttccgaaggaattcca
ggtcaaccgggacatccagggacaaagggcgaaaagggtattagtatcaagggacaccaa
ggatatcctggaataccgggagcggatggattaaaaggagatcctgggcgtattggatct
aaaggagaaccaggtcactgtgaagttatggatcttatcaagggtgtcaagggtgaacct
ggaaaccaaggacagaaaggtgaacccggtccgcctggaactgacggcgaacccggagac
aaaggatttaccggaccatctggaccaacaggaacgcctggtcctagaggcattccagga
cctgtcggacccagaggactccctggaccccgaggagaaaagggaaataccggatcaatg
ggtttccctggtgaagccggacgagacggagaacgaggattccccggaatgccagcgcct
aaaggtgtcaaaggagaaccaggaataccggtcttgggaccaaaaggatcgatcggtccc
tcgggagaaaagggagaaaaaggacttcaaggcccgttcggaagacctggcgtgtctgga
gaaccaggtttacctggtttgccaggagtgaagggagatcaaggtgaacccggtttagaa
ggcttaacaggtcaactaggaccgaaaggagaacccggaccgatcggaccaattggtcca
aaaggatttgacggtcaacccggagctgatggccaaaaaggtgaacccggattgaccggt
gagccaggaagaccaggattacaagggttcccaggacctaaaggcgataccggtttgccg
ggtcccgaaggtccaaaaggattccctggatacagaggcttcgctggtttacctggagca
cccggaatggatggaatacccggacaaaagggagacaaaggtgattccggactaccaggc
cttcctggaatttcaggaaatgaaggcctacccgggttaacaggagaacgaggtgataag
ggtgacgttggtttcccaggaccaccaggggcattcggaatacgtggaccaacaggaccc
aaaggagatcgaggtcctattggattccagggagttaaaggagagcctggtccagtatcc
gaaaaaggacaaaagggagaaccaggtgaatctggtctcagaggcccacaaggcctacca
ggactcgatggtatatctggcgaaaagggagatatgggattccctggtattggcttgcaa
ggatggccaggaccaaagggagatgccggtacacctggttttaatggacaacctggagtt
gatggagataaaggagtgccaggagtacctggtgtacaaggaatgaaaggagatattggt
cctcgaggtttaccgggaataccgggaccaccaggaatggacgggttgaatggtttagaa
ggcagtccaggatatccgggagttccaggaattaaaggtgataaaggagatgttggatac
cctggcagacctggattggacggcatgaaaggagaaaggggtttgcctggattgactgga
cctattgggttaccaggaccaattggagataaaggtgaccgaggattacctggaccagca
gttgacattaagggtgataagggagaacccggtccacctggcttaggtggactgcccggt
ttgcctggaccacccggtctcgaaggcttcccaggtttacaaggagataaaggggacatg
ggaatagcgggaccaagaggttatgctgggcctcctggaccaaaaggcgataaaggtgaa
atcggttatcaaggtcaacctggtttgcctggatttactgtaaagggagaaaaaggatta
ccgggattattgggaaaacacggtagagacggcacacctggtttacaaggcgaaaaagga
gacaaaggtctaccaggattaccaggattgccaggagctggcggacctgcaggattacca
ggtccaccaggagatatgggacctattggaccacctggtttcattggaccacctggagtg
gacggactgccaggagcaccaggttcggatggaataccaggatctttaggtcctaaggga
gaaccaggacttccagctccctatgccgaaaagggcgacaagggtgattcaggtccacca
ggtttacccggatatccaggctcaaagggcgacaaaggtgacagaggtttcccaggtata
cctggattaccgggcattgaaggtttgccaggcgaaaagggattgagtggcttcccagga
aagccgggttcacctggattcagtggacccaagggagacaagggcgaagccggttactcc
ccaccaccaggccccaaaggagagcgaggattacctggacctccgggatggccaggagaa
aagggagaccgtggtcttgacggactaccaggagtgcgtggaattaagggagagagaggc
atacctggcttggagggaccggtcggtccaccaggtctagacggcgataaaggagaacca
ggattggagggattacctggcttgcaaggagcacctggtcattcaggtaacgacggcctt
cccggtagagcttgcgaaactcaaccggattactcgacgggtatactgttagtgaaacac
agccagagctccacgatacccaagtgcgaaggcaaccacgtcaaattgtgggacggttac
agtttgctgtacatcgaaggaaacgagaagtcgcacaaccaagatttaggttttgccggt
tcctgtattcgaaagttctccactatgccgttcttgttctgtgactttaacaacgtatgc
aactacgccagcaggaatgacaagtcctattggctcagtaccaacgcaccgttaccgatg
atgccggtcgaagagttcgaaataaagaattacatttcaagatgtgtcgtgtgtgaagct
cctgccaacgtgattgccgtgcacagtcaagcattgactgtgcccgactgtcccaacgga
tgggaaggactatggataggtttcagtttcgtaatgcacactgccgccggcgctgaaggg
ggcggtcagtccctagctagtcctggttcgtgtctggaagatttcagagcaacgccattc
atcgagtgcaacggagcccgtggcacgtgtcattactttgccaataagttgagtttctgg
ttggccactatcgaccccgatgaacaatttaccagtccacagagacaaacgctgaagaag
gacatgacccgcagtcgcattagtagatgccaggtgtgcatacgcaggacatga
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integrated database retrieval system
