Adelges cooleyi (spruce gall adelgid): 126836699
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Entry
126836699 CDS
T09500
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126836699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126836699
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126836699
U7-dependent histone pre-mRNA processing factors
126836699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Baculo_FP_2nd
MBL_MAP1B
Motif
Other DBs
NCBI-GeneID:
126836699
NCBI-ProteinID:
XP_050426265
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MTSIIHFHSLSGAMDESPPCYLLQIDEYKFLLDCGWDEHFSMGVIDNLKRHIDQIDAVLL
SHPDQFHLGALPYLVGKCGLNCPVYATIPVYQMGQMFMYDLYQSMYNVEDFNLFNLDDVD
AAFDKVVQVKFNQVIALKGKGIGISVVALPAGHTVGGAIWKISKAGEEDIVYAVDFNQKK
ERHLNGSALEKLTRPSLLILDCSNAAYLQARRRTRDETLITNIFTTLRNKGNVLIPTDTA
GRVLELVHMLDQLWRNRNSGLFLYSLIFLTNVSYNTVEFAKSQIEWISDKLMKSFEGARS
NPFSLKHVKLCHNMNDLNNVPEPKLVLASNANLESGFSREVFLMWASNPKNTIILTHRTA
PGTLTRDLIDHGGNRNVKLTIKKRVPLEGVELEEYNNKIDSNKNTLDCSGFDNDTVSMQD
EQKLLADTDCSHSTELTKKDTEPVFPYYEEKFKYDAYGKIIKQEDYINFDNGYVSDVNAA
YAHNNKAVDVQEEVDPNDLPSKCVEYECVIHVAAKITQIDFEGRSDGESLKQTVLSLRPR
RLLLVRGSETNTNTVLDFTKVLSDSRVFAPEVGQFLNVTAETHIYQVRLTNKLLSTISFR
KGKNEELAYIDAKLKLKDNVTGESDMEIDGNTPQHDKLLNVEEQQLYSLEPLPKSEVCSH
EKLFINRLKLSHFKQLLSKNNICCELSGGVLWCCNRTVCVRRNSSGKILIEGLISQDYYT
IRRLLYDQFIVI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccataatacattttcactcgttatcgggtgctatggacgaatctccaccttgt
tacctattgcagatagacgaatataaattccttttggattgtggatgggacgaacacttc
agtatgggtgtaattgataatttaaaaagacacattgaccaaatagacgcagtcttgcta
tcgcatccggatcaatttcatctgggcgctcttccgtacctggtcggtaaatgcggtcta
aactgtccagtgtatgccactatccccgtttatcaaatgggtcaaatgttcatgtacgac
ttgtatcaatctatgtacaacgtagaagattttaatttatttaatttggatgatgtcgac
gctgctttcgataaggttgttcaagtgaaattcaatcaagttattgcgttgaaaggtaaa
gggatcggtataagtgtagtggctttaccagcaggtcatacggtcggtggagctatatgg
aaaatatcaaaagcgggcgaagaagatattgtctacgcagtggattttaatcaaaaaaaa
gagagacatttgaacggtagcgctttggaaaaacttacacgaccgtctttattgatttta
gattgttccaatgccgcttacctgcaagcaaggcgcagaactagagacgaaaccctaata
acaaatattttcactactcttcgtaacaagggtaacgttttaataccaacagacactgct
ggacgtgttttagaattagtgcatatgttagaccaattgtggcgcaatagaaactctggt
ctttttctttattcgttgatattcttgactaacgttagttataacactgtagaatttgca
aaatcacaaattgaatggataagcgataaattaatgaaaagtttcgaaggtgcaagaagt
aatcctttttccttaaaacacgttaagctatgtcacaacatgaatgatttgaataatgtt
ccagaaccaaaacttgtactagctagtaatgctaacctggaaagcggattttcgcgtgaa
gtctttctgatgtgggcatccaatccaaaaaataccattattctcactcatagaactgct
cccggtacactgactcgggacttaattgaccacggaggcaatagaaatgttaaattgaca
attaagaaacgtgtaccattagaaggagtagaattggaagaatataataacaagattgac
tctaataaaaatactctagattgttctggttttgacaatgacactgtatcgatgcaagat
gaacaaaagttgttggcggacactgattgttcacactcgacagagctaacaaaaaaagac
acggaaccagtgtttccttattatgaagaaaaattcaaatatgacgcatacggcaaaata
atcaaacaagaagattatatcaatttcgataacggctatgtgagtgacgtgaatgctgca
tatgcacacaataacaaggcagtcgatgtacaggaagaagtcgatccgaatgaccttcct
tccaaatgtgtggagtacgaatgtgtgatacacgttgctgcgaaaattacacaaatcgat
tttgaaggacgttctgatggggaatcgttaaaacaaactgtactttcattgaggccaagg
cgtttattgttagtgaggggttcggaaacaaacacaaacactgttttggactttacaaaa
gttttgtccgacagtagagtatttgcacctgaggtgggccagtttttaaacgttacagca
gagacccatatttaccaagtacgtttaaccaataagctactttcaacgataagttttcga
aaaggtaaaaatgaagagttagcgtatattgacgcgaaattaaaactaaaagacaatgtg
actggtgaaagtgatatggaaattgatgggaataccccccagcatgataaattgttaaac
gtggaagaacaacagctgtattcactagaacctttaccaaagtcagaagtttgttctcat
gagaaattattcattaatcgtttgaaactgtcacattttaaacaattattatcaaagaac
aatatatgctgtgaactatcaggaggagttctatggtgttgtaatcgcactgtgtgtgtt
cgtagaaattcatcggggaaaatacttatagaaggattaataagtcaagattattacacg
atacgccgtcttttgtacgatcagtttatagtaatttga
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