Adelges cooleyi (spruce gall adelgid): 126836809
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Entry
126836809 CDS
T09500
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126836809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoo03021
]
126836809
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126836809
Transcription machinery [BR:
acoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126836809
RNA polymerase I system
126836809
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
126836809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
Spt5-NGN
KOWx_SPT5
KOW6_SPT5
Spt5_N
KOW7_SPT5
KOW1_SPT5
GPKOW_C
DUF3912
DUF5847
Motif
Other DBs
NCBI-GeneID:
126836809
NCBI-ProteinID:
XP_050426414
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MSDYDSDVGSYRGGSDSEEESNVYHKHSPSRSASRSRSRSRSGSGSEAEENNQEEEVADE
QEPEGEDLNSEDEYDEEEDEENDRPGKKKKKNERFGGFIIDEADVDDEVEEDEEWEDGAG
DYGIVANEVDELGPTAREIEGRRRGTNLWDSQNEDEIEEYLKKKYADASVAIKHFGDAGD
ELADEITQQTLLPGVKDPNLWMVKCRIGEEKSTALLLMRKFIAYQFTDNPLKIKSVVSPE
GVKGYIYIESYKQTHVKTAIENVTSLKMGIWKQQMVPIKEMTDVLKVVKVQTGLKPKQWV
RLKRGLYKDDIAQVDYVDLGQNQVHLKLLPRIDYTRPRGALRSSMDSEALKRKKKRRPAA
KPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFYMNAISTDGVKPTLSELEKFE
ETPEGIDIELPNVNKDSSTNSQALSAGDNVEVCTGELINLQGKVISIDGDMVTIMPKHDD
LKMPLEFTANELRKFFKQGDHVRVVGGRYEGDTGLIVRVEQNRIVLFSDVTMHELEVLPR
DLQLCSDMASGVDSLGQFQWGDLVQLDPQNVGVIVRIEREKMHILNMAGKLVEAKPQSLN
KKKEHRNTLGVDALGNSVQRKDVIKVIDGPHTGMHGEIKHLYRHHAFLYSRLMTDNGGIF
VCRLRHIALAGNTTNKAITAPQNGFASPQITSPRHTPGSPFGAGGRGGGGGGGGGGGSRF
GGVRRDRDLIGQTIRITGGPYKGAVGIVKDATECTARVELHSSCQTISVDRRNITIVGQQ
QKDGRLTSSYSRTPSNGMMTPGYREGGKTPVHGSMTPNYEAGSRTPAYGSMTPSHDGSKT
PTQAWDPAAGYTPARDDELEYPMDPNTPYAQTPNTLFGSDHSYSPYQAVSPSGSGYTSSA
ASVQYHPAPSPSGSYTSLMTPSSVSSPGIAAPSLSSFGSNFNGLPVGWHTTDIYVRIGDS
DLAGQTGIIKEVGEAMCILYLPDEDREVTIENENLEPIMPKLNDYIKVLAGQHLGRTGSM
VALEGSEAVVVMPDEKNPMLVPLLYLCKAN
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattatgacagtgacgtgggcagttaccgtggcggcagcgatagtgaggaagag
tcaaatgtatatcacaagcattcaccgagccgcagtgccagcagaagtagaagtagaagt
cgatcgggtagtggctcggaagctgaagaaaataaccaagaggaagaagtcgcggatgaa
caagaacctgaaggcgaagatttaaactcggaggatgaatatgacgaagaagaagatgaa
gaaaatgatcgtccaggaaagaaaaaaaagaagaatgaacgttttggtggtttcattatt
gatgaagctgatgttgatgatgaagtcgaagaagacgaagagtgggaagacggtgccggt
gattatggtattgttgcaaatgaagtagatgaattaggtcctactgctagagaaattgaa
ggacgcagacgtggaacaaacctttgggactctcaaaatgaggacgaaattgaagaatat
ttaaaaaaaaagtatgcagacgcttctgtagcaattaaacactttggagatgcaggcgat
gaacttgctgatgaaatcacacagcaaacgcttttaccaggcgttaaagatccaaattta
tggatggtcaaatgtcgtattggcgaagagaaaagtacggctttgttattaatgagaaaa
tttatcgcttatcagttcacggataacccattaaaaataaaatcagtggtttcgcctgaa
ggggtaaaaggttatatatacattgaatcgtacaagcagactcacgttaagacagccata
gaaaatgttaccagccttaaaatggggatttggaagcaacaaatggttcctattaaagaa
atgactgacgtactgaaagtggtcaaagttcaaacaggtttgaaaccgaaacaatgggtg
cggttgaaaagaggtttatacaaagacgacatagctcaagtagactatgtagatttgggt
cagaaccaagtgcatttaaaattattaccaagaatagattacaccaggcctcgcggtgcg
ttaaggtcttcaatggattcagaagctttaaaaaggaaaaagaaaagacgtccagccgcc
aaaccttttgacccagaagcaattagagctattggtggtgaagtaaccagtgacggtgat
tttttaatatttgaaggaaatcgttacagtcgtaaagggtttttgtataaaaatttctac
atgaatgcaatctcaactgatggagttaaacctacattgtcggaacttgaaaaatttgaa
gaaactcccgaaggcatcgacattgaattgcctaatgtcaataaagatagttcaacgaac
agtcaagccttaagtgcaggtgacaatgttgaagtttgtactggagaattgattaacctc
caaggtaaagtgatatcgatcgacggtgatatggttactatcatgccaaagcacgatgat
ctcaagatgccgttggaatttaccgctaatgaactcagaaaattcttcaaacaaggtgac
catgtccgagtagttggtggacgttacgaaggagacacaggtcttattgtgcgtgttgaa
caaaatcgtatcgtgttattctccgacgtgacaatgcacgagctagaagttttacctcgt
gatttgcaattatgttcggatatggcttctggagtggattcacttgggcaattccaatgg
ggcgatcttgttcaattagatccgcaaaatgtgggtgttatagtgagaattgaacgggag
aaaatgcacatacttaacatggctggaaaattagttgaagcaaaaccccaatctctgaat
aaaaagaaagaacacagaaacactcttggtgtggacgcacttggcaattctgtgcagagg
aaagatgttattaaagtcattgacgggccccatacaggaatgcatggagaaatcaaacat
ctctatcggcaccatgcctttttatactctcgtttaatgactgataacggaggaattttt
gtgtgccgtctaagacatatagcgttggctggaaatacaactaataaagctataactgct
ccacaaaatggattcgcatctccacaaatcacatcacctcgtcatacacccggcagtcca
tttggtgctggcggacgtggaggtggtggtggcggcggtggaggtggaggaagtagattt
ggtggagtacgcagagaccgagacctaattggtcaaacaatacgaatcactggtggtcct
tataaaggagctgttggcattgttaaagatgcgactgagtgtacggccagggttgagctt
cactcatcgtgtcaaactatatcggtcgataggagaaatatcacaatagttggacaacaa
cagaaggatggaagattaacatcgtcatactctagaacaccttctaatggcatgatgaca
cctggatatcgtgaaggaggcaagacgcctgtgcatggctcgatgactcctaattacgaa
gctggaagccgtactccagcctacggaagtatgacaccttcccacgatggatctaagacg
cctacacaagcttgggatcctgctgcaggatacactccagctagagacgacgaactagaa
tatccaatggaccctaatacaccctatgctcaaacaccaaacacactatttggatcagat
cattcgtattcgccatatcaagcagtatcaccatctggtagtggttatactagcagcgct
gctagtgttcagtatcatcctgcaccgtcgccttcaggttcgtacacaagtttaatgacc
ccgtcatcagtgtcttctcctgggatcgcagctccttctttgtcgtcatttggttcaaac
ttcaatggattaccagtgggttggcacactacagacatttatgtacgtataggagattca
gatttggccggacagacaggaattattaaagaagtgggcgaagcgatgtgtatattgtat
ttgccagacgaagatcgagaagtgacaattgaaaacgaaaatctggagccgatcatgccc
aaattaaatgactacatcaaagttttggccggtcagcacttaggcagaacaggcagtatg
gtagcactagagggcagtgaagcagtagtagtaatgccggacgaaaagaacccaatgctc
gttccattgttatatttatgtaaagcaaactaa
DBGET
integrated database retrieval system
