Adelges cooleyi (spruce gall adelgid): 126836844
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Entry
126836844 CDS
T09500
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126836844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoo03041
]
126836844
Enzymes [BR:
acoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126836844
Spliceosome [BR:
acoo03041
]
Complex A
U2 snRNP components
U2 related factors
126836844
Complex B
126836844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
126836844
NCBI-ProteinID:
XP_050426456
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MVRSGSDRNHRKRSRSRTRSPRRHRRSRSRSPRHKSHKSTRDRKKSRSPHRSRSPRSKRK
TPDRRPEEVLFDPTNPDKETEQKKLEIEMQKRRERIERWRAERKKNELDSVKTDVRTTIM
SNLQIPSKKWNLEDDSDEDDENGADKAVEVEEIDPLDAFMQGVQEEVRKVNKLDGHRSHL
PDKSTLNESGQSPGVDTTSSGVVIVSGVAKRKDNNTRGELIEQNQDALEYSSEEEQEDLN
VAAASLANKQKKELPKIDHAGIAYLPFRKNFYVEVPEITRMTPEEVEKYKEELEGIRVKG
KGCPRPIRVWAHCGVTKKIMDNLKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLEDTDGPIAIVMAPTRELCMQTSREARKFTKSLGLRVVSVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYIVLDEADRMFDMGFEPQVM
RVIDNVRPDRQTVMFSATFPRQMEALARRILQKPIEVQIGGRSVVAKEVEQHVVIVEEEQ
KFMKLLEVLGLYYDKGSCIVFVDTHENADALLQKLMKASYPCMTLHGAIDQYDRDSTIVD
FKSGQVKLLVATSVAARGLDVKDLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTLVS
PDQEKYAGDLIRALETSTVQVPEALRTMWLRYQAKQAAEGKQVHKGGGFSGKGFKFDETE
AVMANEKKKLQKAALGLQDSDDEDIEGDIDQQIETMLAPKRIVKEIKASALGLPNLTGSM
ESNGTPQSSERLELAKRLASRINIAKNLGPDAKGASQQTAEAILKGGLSSSHPVITAKTV
AEQLAAKLNTRLNYQPKEEDVDSDSNDGAETGTEETFRKYEEELEINDFPQQARWRVTSK
EALAQISEYSEAGITVRGTYYPPAKNPPEGERKLFLAIESTDELAVSKAKIEITRLIKEE
LLKMQTSAHHMVNKARYKVL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcagcggaagcgatagaaaccaccgaaaacgatccagaagtcgaacgcgaagt
ccacgacggcatcgtcgaagccggtcgcggtcgcctcgtcataaatcccacaaatccaca
cgagatagaaaaaagtcacgttcgcctcatcgttcacgttctcctcgtagcaagagaaag
actccggaccgtaggccagaagaagttctttttgacccgaccaatccggataaggagacc
gaacagaaaaaactcgaaatagaaatgcaaaagcgtcgtgaacgcattgaacgttggagg
gcagagcgtaagaaaaatgaattggacagtgtcaaaacagatgttagaactactattatg
tccaatttacaaattccatctaaaaagtggaatctcgaagacgacagcgacgaagatgat
gaaaatggcgccgacaaagctgtcgaagtggaagagatcgatcctctcgatgctttcatg
cagggtgttcaagaagaagtacgtaaagtcaacaaactagatggtcatcgaagtcatttg
cccgataaaagtacgttgaacgaatctggtcaaagtccgggagttgacacgaccagctct
ggtgttgtaatcgtttctggagtggccaagcgaaaagataacaacacaagaggagaactt
atagagcagaatcaagatgcactcgagtactcgtcagaagaagaacaagaagatttgaac
gtggccgccgctagtttagcgaacaagcaaaagaaagaactaccgaaaatcgatcatgcc
ggcatagcatatttgccgtttaggaaaaacttttatgtcgaagtacctgagattactcgt
atgactcctgaagaggttgagaaatacaaagaggaattggaaggtattcgtgtaaaaggt
aaaggatgtcctcggccgattagggtttgggcccactgtggcgtgaccaagaaaatcatg
gacaatctcaaaaaacataactacgaaaaacccactcccatacaagcacaagccataccc
gctattatgtcgggccgtgacctcattggcatcgccaaaaccggcagcggcaagacgctt
gcatttctgttgcccatgttcagacacatattggatcaaccgcctcttgaagacacggac
ggacccatcgctatcgtcatggcacctacacgtgaactctgtatgcagaccagtagagaa
gcgagaaaattcacaaagagcttaggcttgcgtgtcgtatccgtgtacggaggtactgga
atatcggaacagattgccgaattgaaacgaggtgccgaaataatagtgtgtacaccgggt
agaatgatcgatatgctggcagcaaacaacggtagagtgacaaatttaagacgtgttacc
tatatcgtactggacgaagccgatcgtatgtttgatatgggctttgagcctcaagtcatg
cgagtgattgacaacgtacgtccagatcgacaaaccgtaatgtttagcgctacttttcca
cgtcaaatggaagcattagcaagacgtatactgcaaaaacctattgaagtccaaattggt
ggtcgaagtgttgtcgctaaggaagtcgaacaacacgtcgtcattgtcgaagaagagcaa
aagtttatgaagttgctcgaagtgttgggattgtactacgacaaaggaagttgtattgtg
tttgtggatacgcatgagaacgccgatgcacttttacaaaaactaatgaaagcgtcgtat
ccttgtatgactttgcacggcgctatcgatcagtacgatcgagacagcacgattgtggac
ttcaagagcggtcaagtcaagttgttggtggccacttctgtggcggccagaggattagac
gtcaaagatttgattttggtagttaattacgattgccctaatcattacgaagattatgtt
catcggtgcggaaggacgggaagagcgggaaataagggatttgcgtacactctagtttcg
cccgaccaagaaaaatatgccggcgatttgatcagagccttagaaacgtctaccgtacaa
gtgccggaagctttacgtaccatgtggttacgctatcaagcgaaacaagcagccgaagga
aagcaagttcataagggaggcggtttcagtggaaaaggatttaaatttgacgaaaccgaa
gcggtgatggccaacgaaaagaaaaagctacagaaggctgcgctcggcctacaagattcc
gacgatgaggacatcgaaggcgatatagaccaacagattgaaaccatgttggctcctaag
cgaatcgtcaaggaaatcaaagctagcgctttgggactgcccaatctgactggctcgatg
gaatctaacggaacgccgcaatcgtccgagcggttggaattggctaaacgtttggcttca
cgcattaacatagccaaaaatcttggacccgacgccaaaggtgcgtcgcagcaaaccgca
gaagccatactcaagggaggtctttccagttcacacccggtgatcaccgccaagactgtg
gccgaacagctggcggccaaactgaatacgcgactaaactatcagcccaaagaagaagac
gtcgatagtgacagcaacgacggcgccgaaaccggaaccgaagaaacgtttagaaagtac
gaagaagaattggaaatcaacgatttcccgcaacaggccagatggagggttacgtcaaag
gaggcgttagctcaaatatcggaatactccgaagccggtatcaccgtgagaggcacttac
tatccgccggccaagaatccacccgagggagagcgtaaactgttcttggccatcgagagc
accgacgagttggccgtatcaaaagcgaaaatcgaaataactcggctgatcaaagaggaa
ttactgaaaatgcaaacgtcggcacatcatatggtcaacaaggccagatacaaggtcctt
tag
DBGET
integrated database retrieval system
