Adelges cooleyi (spruce gall adelgid): 126836862
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Entry
126836862 CDS
T09500
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoo03041
]
126836862
Enzymes [BR:
acoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126836862
Spliceosome [BR:
acoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126836862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
AAA_19
HA2_C
nSTAND3
ResIII
HA2_N
NB-ARC
AAA_11
AAA_23
AAA_22
FtsK_SpoIIIE
T2SSE
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
126836862
NCBI-ProteinID:
XP_050426478
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MTEACRENPSTTVMNEQLVSNPMPPFQQSDSKTTLPFMSHLPMVVPQLSSNKNLICSRMR
LPIMQKNELIIQLIENNPVIIISGETGCGKTTQVPQMIIDHSATTKRPSRVVCCQPRRIA
AISMAHRVSNERGEKIGTSVGYQVRFQSCLGSNATITYCTIGILTRALVIHHQNDNEPIK
NMFMNISHIIIDEVHERTKHVDFLLVALRMILPRYPHLKLILMSASADIRLFSSYFYDCP
VLQVNGRLFPVQQYFLEDVLDMTNYSTPTMIDLVLRNNPTERIPDTNNLTERTTESSQNM
RLTIIPNTALSHDQEWLKPELDECLQKIWRTGDIAEVNKMIYHYIRTEGVPVNYQHTSTG
VTLLMSIVIHSLDEYVLQLLHMGADPTIQNNFSPSKSAAALAASLNHFRISDMIKNFNYV
PTNNPPVILDKMQRLGLYKEDILHGHIDSHLTTHLIRHLILYKPFGSILVFLTGYSDIAV
VENAITEDLIKKHNFKIEIYKLHSLILDDRKRVFLPAPEGYRKVVLATNIAETSVTINDI
VYVIDSGKVKQPMFNFIERSHALHSKQISHSCAMQRAGRAGRLCAGEYYCFYTLEDFIHM
KYYDEPEIKMIPLEELSLLAKAAARSMRVEDFLSLAIEPPSHHAVKKSLGYLKAIEAMDT
NENITDLGYMLLDLSIEPHHAKILIFGLFLKCIDPVLFIVSFLANKYPFNLNLKTSEVWS
ICKNLAEDTLSDHFVFIRLYQAITKPNISEEIQKAVCPTVIDQIKKTRYKLLTQLKDLNF
IQTMDDLKDFNTNSSNWAAVKACVLAGSYPNLSMLEPRSEESFTTRIMSEVLLHGSSVLH
GTNFGSLPSKWIVFEQLCSCHGRKRMRNCSVISSLTVLLFANAMQITPCIRTIEIDDVLA
CIRLLFLTGRNVSMQSHIHLLALDGWIKLSADLNDLEKMLNIRLCLTLAYREFLKNKTLP
NNSMHSRIVQTVVKLLEEEDLAMGLTVPEDIGN
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagcctgtcgtgaaaatccttcgactacggtaatgaacgagcaactagtgtca
aatccgatgcctccgtttcaacaatccgacagtaaaacgacccttccgtttatgagtcat
ttgcctatggttgtaccccagctcagcagcaacaaaaacctaatatgtagtagaatgcgg
ttaccgataatgcaaaaaaatgaactcattattcaattaattgaaaataacccagtaata
attataagtggcgaaactggatgtggaaaaaccactcaggtaccacaaatgataattgat
cattctgcgacgacaaagagaccgagtcgtgtggtgtgttgtcaacccaggagaatagcc
gctatatctatggcacatagggtgtctaatgaacggggtgaaaaaatcggaacgagcgtt
ggttatcaagttcgattccaaagctgcctcggaagtaacgcaacaataacttattgcacg
attggaattctgaccagggcacttgtaatccatcatcaaaacgacaatgaaccaattaag
aacatgtttatgaacatttcacatataattattgatgaagtccacgaacgtactaagcac
gtagactttctgctggtagcgctgcgaatgattttgccaagatatccacatctgaaactg
attcttatgtctgcatcggcagatataagattgttttcatcttacttttacgattgcccc
gttttgcaagttaatggaaggcttttcccagtgcaacaatatttcttagaagacgttcta
gatatgaccaattattcaacgccaacaatgattgatcttgttttgagaaataatccaacc
gaacgcatcccggataccaataacctgacagaaagaacgactgaatcatctcaaaatatg
cgtcttacaataattccgaatactgcattgagtcatgatcaagaatggttaaaaccggaa
ttagatgaatgtttacaaaaaatttggcgtactggagatattgctgaagttaataaaatg
atatatcactacatacgtacggaaggcgtacctgttaattatcaacatacttctacaggt
gtaacattgttaatgtcgattgttattcattctcttgacgagtacgttcttcaattgcta
cacatgggggcagacccgacaatccaaaataattttagccccagcaaaagtgcagcagct
ttggcagccagtttaaaccattttcgaataagtgatatgattaaaaatttcaattatgta
ccaactaataaccctccggtaatattggataaaatgcaaagattgggtttgtataaggaa
gatatattgcatggtcacattgattcacacttgacaacgcaccttattagacatctgatt
ttgtacaaaccatttggttctattttagtgtttttgacaggatattccgatatagccgta
gtagaaaacgctataaccgaagatcttattaaaaagcataactttaaaatcgaaatttat
aaattacactcgttaatattggacgatcgtaaaagagtctttttaccggcaccggaagga
tatcgcaaagtcgtgttggctacgaatattgccgagaccagtgttacaattaatgacatt
gtatatgttattgattcaggcaaagtgaaacaacctatgtttaattttattgaacgaagc
cacgccttgcattcaaaacaaatatcgcacagttgtgcaatgcagagagccggacgtgca
ggacgattatgtgcaggcgaatactactgtttttacacgctagaagatttcatacatatg
aaatactacgatgagcctgaaattaaaatgatacctttagaagaattaagcctgttggcc
aaggcagccgctagaagtatgagagttgaagatttcctatcgttggctatagaaccacct
tcacatcacgctgtaaaaaaatctcttggctatttaaaagcaattgaagcaatggacact
aacgagaatataaccgacctcgggtacatgttgttggatttgtcaatagaaccgcatcat
gccaaaatactgatatttggattgtttttaaaatgcatcgatcccgtactttttatagtt
agttttttagccaacaaataccctttcaacctgaacctgaaaacatcagaagtgtggtcc
atttgtaaaaatctggctgaagacactcttagtgatcatttcgtttttattcgtctttac
caggctattactaaaccaaatatttctgaagagatacaaaaagctgtatgtccgacggta
atagatcaaataaaaaaaacacgatacaaattactaactcaactaaaagatttaaatttc
atccaaacgatggacgatttaaaagattttaacacaaactcaagtaactgggctgcggtt
aaagcttgtgtgttggctggatcttatccaaatttgtccatgctagaaccaagatcggag
gaaagttttacaaccaggattatgagcgaagttctactgcacggatctagtgttttgcac
ggaaccaacttcggaagtttgccgtccaaatggattgtttttgaacaattgtgttcatgc
cacggtagaaaacgtatgaggaactgctcagttatatcatcattgactgttctgttgttt
gcaaatgcgatgcaaattacaccttgcatcagaacgatagaaatagacgatgtactcgca
tgtatacgtttgctgtttttgacgggaagaaatgtatcaatgcaaagtcatatccatcta
ttagccttggatggctggattaaactctcggctgacttaaacgacttagaaaaaatgtta
aacatacgtttgtgtctcacgttggcttatcgcgaattcctcaaaaataaaacattacca
aataacagtatgcatagtcgtatagtccagacggttgtcaagttattagaggaagaagat
ttggctatgggcttgactgtccccgaggatattggaaattag
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