Adelges cooleyi (spruce gall adelgid): 126838003
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Entry
126838003 CDS
T09500
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126838003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126838003
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126838003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_12
ARM_TT21
ANAPC3
TPR_1
TPR_4
ARM_TT21_N
ANAPC8
DUF6119
Motif
Other DBs
NCBI-GeneID:
126838003
NCBI-ProteinID:
XP_050428024
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MSDKADQQNGKGATASNITDQERDWAQQALAEYEQKNYKACLQTLERIEAVRPNDPKVML
NKAVVEFYKNDLCTTDKFRKSFSDVCSQIDVNLELLDSLEDVENCIYYYNYAVLLCHLKY
YTKALTVINKVYAFIESLEESLAHKVCLLVVQLHLETHKPSEALKLITYIESQFVSTDNA
TNILTGTGDQGPIHHTEPEKQKANLDAATDAFRISLIQYRVRCLMELNQFDECSQQLDTI
KEKQDSVTLFLLGKLEYLRGNHKEALDILKEVPLTDNFKETGECPHVLIKNNVACLYHNT
KKPTIAYMSMFKAIDSHQKNIENVTKPIQGEGVLSGQPLHVIGASIKTELMFNLGISLLH
AHKPEEAFDCLIEAVQTYHMNPRLWLRLAECCVMAHKSSNDRDFDFKKSYIEGVVGSGKH
RKIILKSHLFPDTKYSCEAVSAAVPMPSLEFGSLCIRNAAWLIQGDTVDYSPSHAPIDSE
KHYLIGCIQSSGAYIALCLGDPVVALQFSQELIKSDKINKVLKFLGHLYAAEALILLDKP
NEAIDMLKESSALDDLEPELHEQLTAENWKPDQQKSAKAVLYYNLAVALTLRGDLDKAGE
LLKQIWLSKIEHVSVPVHVVILALYIHLRLGQKEIAITLIKQNCPQAKR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaagcagatcagcagaacggtaaaggagccactgcaagcaacatcaccgat
caagaacgggattgggcccagcaagcactggctgagtatgaacaaaagaattacaaggct
tgtctgcagactctggagcggatagaagctgtacggcccaacgatcccaaagtcatgctc
aacaaggcggtcgtagagttttataaaaatgatctgtgcacgacggacaaatttcgcaag
tcgttttcagacgtttgctcacaaattgacgttaacctggaactcttagactcgctggaa
gatgttgaaaattgtatttactattacaattacgccgtcttgttatgccacttgaaatac
tacacaaaggccctgactgtaatcaataaagtatatgctttcatagagtctctagaggaa
agcctagctcataaagtgtgcctgttggtggttcaacttcatttggaaacccacaaacct
tctgaagcgctcaaactgataacatacatcgaaagtcagtttgtatcgacggacaatgcc
acaaatatattgaccggtaccggagaccaaggtcctattcatcacacggaacctgaaaaa
cagaaagcgaatttagatgcggccaccgatgctttccgaataagtctgattcaataccgc
gtaaggtgtttaatggaactcaatcaatttgacgaatgtagtcaacaattagatactatt
aaagaaaaacaggattcggtaactttgtttctgctgggtaaattagaataccttcgtggt
aatcataaagaagcattggatatattgaaagaagttcctcttacagacaattttaaggaa
acaggagaatgtccacacgtcttgataaaaaacaatgtggcatgtttgtatcataacact
aaaaaacctacaatagcttatatgtcgatgttcaaagcgattgatagtcatcaaaagaac
atagaaaacgtaaccaaaccaatacaaggcgaaggtgttttatcgggtcaaccacttcat
gtgatcggcgctagtatcaaaactgaactaatgttcaatttgggcataagtttattacac
gctcataagccagaggaggcgtttgactgtttaatagaagcagtacaaacgtatcacatg
aatccgagattgtggttacgattagccgaatgttgcgttatggcacacaaaagcagtaac
gatagggatttcgatttcaagaaatcttatattgaaggcgtggtgggctctggtaaacac
cgaaaaataattttgaaatcccatttgttcccagatactaaatacagttgtgaagcggtt
tctgccgctgtacctatgccaagtctcgaatttggttctttgtgcattcggaatgcagct
tggttgatacaaggagatacagttgattattcaccatcgcacgcgccaatcgattctgaa
aaacattatctcattggctgtattcagtcgtctggagcatatatagccctgtgtcttggt
gaccctgtagtggcactccagttttcacaagagttaatcaagtcggataaaataaataaa
gttctcaaattcttaggtcacttgtacgcagcagaagcattaattttattagataaaccc
aatgaagctattgatatgcttaaagagtcaagtgcattagacgacttggaacctgaatta
cacgaacaactcactgctgaaaattggaagccggaccagcaaaagtctgcaaaagccgtt
ctttattataacttggcagtggcattgacacttaggggagacctagataaagccggagag
ctactcaaacaaatatggctgtcaaaaattgaacatgtttcagtcccagtgcatgtagtc
atattggctctttacattcacttacgactaggtcaaaaagaaattgcaataacattaatt
aaacaaaactgtccacaagcaaaacggtag
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