Adelges cooleyi (spruce gall adelgid): 126838391
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Entry
126838391 CDS
T09500
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo04120
Ubiquitin mediated proteolysis
acoo04137
Mitophagy - animal
acoo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126838391
04120 Ubiquitin mediated proteolysis
126838391
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126838391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoo04131
]
126838391
04121 Ubiquitin system [BR:
acoo04121
]
126838391
03029 Mitochondrial biogenesis [BR:
acoo03029
]
126838391
Enzymes [BR:
acoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
126838391
Membrane trafficking [BR:
acoo04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
126838391
Aggrephagy
Other aggrephagy associated proteins
126838391
Xenophagy
Other xenophagy associated proteins
126838391
Ubiquitin system [BR:
acoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
126838391
Mitochondrial biogenesis [BR:
acoo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
126838391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
ubiquitin
IBR_1
IBR
Rcat_RNF216
Rad60-SLD
FSAP_sig_propep
Motif
Other DBs
NCBI-GeneID:
126838391
NCBI-ProteinID:
XP_050428730
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MNIFDTILRIIRRLLDTIFTKRITNSLLIYVKTNTGSIVPVGLDPKWEVRDVKEFVAPKL
GMTPEEVMIIFAGKELHDSELLEEYNLAEQTVLHAVKTRRRSFKRDQRISICEEENEDDE
FDNTKRAVANFYVYCSSPCSTTTVGKIRVRCFKCKNGAFTVDGDPKNWNDVLKPKRITGH
CEISECTDGEVGWSEFYFKCSEHITKGETDEAVALHLVRNNLHHIPCLACTDVKPKVFVY
PCVDGHVTCLECFCDYAVSRLRERRFISDINFGYTLPCPAGCPDSLISQLYHFKTLKQEQ
YEMYERFAAEEYVLHQGGVLCPQPGCGAGILVDDECDKVTCINGCGYVFCKKCLQGYHIG
DCFPREEQLISDIAGYSIDPKLASQAKWDDASNVKIKVSTKPCPKCRTATERDGGCMHMV
CTRCSFPWCWLCQTEWSRECMGSHWFN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattcgataccatattacgaataatccgtcgtctcttagacacgatattcacc
aagcgaatcaccaattcattactgatatacgtcaaaaccaatacaggctcaattgtgcct
gttggcttggatccgaaatgggaagtaagagatgtcaaagagtttgttgcgccaaagttg
ggaatgactccggaggaagtgatgattatatttgccggtaaagaattacacgactcggag
ttactggaagaatataatctagctgaacagacggttttacatgcagttaagactaggcgt
cggtcatttaaacgtgatcaacggatatctatttgtgaagaagaaaacgaagatgatgaa
tttgataacactaaacgagctgtagctaacttttatgtttactgttcttcgccttgttct
actacgacagttggtaaaattcgtgttcgatgtttcaaatgcaaaaatggtgctttcaca
gtagatggcgatccgaagaattggaatgacgtacttaaaccaaaaagaattactggacat
tgtgaaatatcagaatgtacagatggagaagtagggtggtcagaattttattttaaatgt
tctgaacacattaccaaaggtgaaactgatgaagctgtagcattacacctagttagaaac
aatctacatcatattccttgtttggcatgcaccgatgtgaaaccaaaagtatttgtgtat
ccttgtgtggatggtcatgttacgtgtttagaatgtttttgtgattatgcagtaagccga
ttaagagaaagacgatttatttctgatattaattttggttatacattaccttgtccagcc
gggtgtcctgatagtttgataagtcaactttatcatttcaaaaccttaaaacaagaacaa
tatgaaatgtatgaaagatttgcagctgaagagtatgtgcttcatcaaggtggagtatta
tgtccacaacctggatgtggtgccggaattcttgtggatgacgaatgtgataaagtgacg
tgtatcaatggatgtgggtacgtcttttgtaaaaaatgtttgcaaggttatcatatagga
gattgctttccaagggaagaacagctcattagtgatatagctggttactctattgaccca
aaacttgcatcacaggctaaatgggacgacgcaagtaatgtaaaaataaaagtatcgact
aaaccttgccctaagtgccgcactgctacagaacgagatggtggctgtatgcatatggta
tgtacacgatgttcgtttccgtggtgttggttgtgccaaacagaatggtcaagagaatgt
atgggaagccattggttcaactaa
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