Adelges cooleyi (spruce gall adelgid): 126838505
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Entry
126838505 CDS
T09500
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126838505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126838505
03041 Spliceosome [BR:
acoo03041
]
126838505
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126838505
Spliceosome [BR:
acoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126838505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
PQQ_3
ANAPC4_WD40
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
126838505
NCBI-ProteinID:
XP_050428954
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MVIGYCVKNLNNRITYNHKMVDKKYYTTILSQTFSPCGNYLITGNNYGILTVYNLKHELH
SDNDLRDSEFSKDQSYGFEMIRKMQISSLASGDKFLIVGGVGLIVGVDWDTIIGSNYEEN
SKIEPLSISWSINIPAPKDSMLTVDVNCMILNKEDNILYAGCGDNIVYAFNLECGDVIHK
LEGHSDFIHSIDDLNDTISSASEDGSVLFWDKRTKTFTSKIIPSSNPAIRRPDLGNWIGS
VTITKDWMLCGGGTKLSLWNRSMAAPMTVYNTTEDSGIHVTKLMDESLYAGGCSKYFYQL
SFTDEVMCKIETSPVTVFSCVSQDSPFKVMCLAGSSNKIDVCTNLNYKMTTLGL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggtaataggttattgcgtaaagaatttaaataatcgcataacttataatcataaaatg
gtcgacaagaaatattacacaaccattttgtctcaaactttttctccgtgtggaaattac
ttaatcactggtaacaactatggtattctaacagtatataatttaaaacatgaattacat
tcggataatgatctcagagattcagaattttcaaaagatcaatcttatggatttgaaatg
ataagaaaaatgcaaatcagtagtttagcgtccggagataaatttttaatagttggcggt
gttgggttaattgtgggtgtggattgggatacaattatcggtagcaactatgaagaaaat
tctaaaattgaacctttaagtatcagctggagtataaacattcctgctcccaaagattca
atgttaactgtagatgttaattgtatgatcctcaacaaagaagataacattttatatgct
ggttgtggagataacattgtttacgccttcaatttagaatgcggtgatgttatacataaa
cttgaagggcacagcgactttattcactcaattgatgacttaaatgatactatttcatcg
gcaagtgaagacggatccgttttattttgggataaacgtactaaaacttttacatctaaa
ataattcccagcagtaatccagctattagaagaccagacttagggaattggataggttcc
gttacaatcactaaagattggatgttgtgtggtggtggaactaaattgtcgttatggaac
cgttccatggctgctccgatgactgtttataatactaccgaagattctggaatacacgta
actaaactgatggacgaatcattgtatgcaggagggtgttctaaatatttttatcagcta
tcgtttactgatgaagtgatgtgtaaaattgaaactagtccagtaacggtcttcagttgt
gttagtcaagacagtcctttcaaggtaatgtgtcttgctggttctagtaacaaaatagac
gtctgtaccaacttgaattacaaaatgactactctaggactttaa
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