Adelges cooleyi (spruce gall adelgid): 126839042
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Entry
126839042 CDS
T09500
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03020
RNA polymerase
acoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126839042
09124 Replication and repair
03420 Nucleotide excision repair
126839042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoo03021
]
126839042
03400 DNA repair and recombination proteins [BR:
acoo03400
]
126839042
Enzymes [BR:
acoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126839042
Transcription machinery [BR:
acoo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126839042
DNA repair and recombination proteins [BR:
acoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126839042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
126839042
NCBI-ProteinID:
XP_050429933
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MYDLGEDDYEEEEENEEISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPQIELQAESQHTHGEIDTPTKYQIKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTVLKDGEELVVTQHSKSFIGKIPIMLRSTYCLLFGLNDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKAEIRSCLEHSSRPTSTLWVNM
MARGGQSIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYA
QKFIDRGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIVDATKIFVNGCWVGIHRDPEQLMGTLRKLRRQMDIIVS
EVSIIRDIRDREIRIYTDAGRICRPLLIVENGKLLLKKRHIDSLKERDYNNYGWQVLVSN
GVVEYIDTLEEETTMIAMSPDDLRQEKEFAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEVFEKPNRATCQ
GMRNAIYDKLDDDGIISPGLRVSGDDVIIGKTMTLPDNEDELEGTTKKFSKRDASTFLRN
SETGLIDQVLLTLNSEGYKFCKIRVRSERIPQIGDKFASRHGQKGTCGIQYRQEDMPFTS
EGVSPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISTLLQEY
GYHLRGNEVMYNGFTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVTN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatttgggagaagatgattacgaagaggaagaagagaacgaagagatttccagt
gagctttggcaagaagcttgctggatagtaataaattcttatttcgacgaaaaaggattg
gtaagacaacaattggattcgttcgacgagtttattcagatgtctgtgcaacgaatagta
gaagattctccgcaaatcgaattacaagcagagtctcagcacacacatggtgaaattgat
actcctacgaagtatcaaattaaatttgaacagatttatctgtccaaaccgacccattgg
gagaaagacggttccccatcccccatgatgccaaatgaagccagactccgtaacttaaca
tattccgctccactttatgtagatattacaaaaactgtacttaaagacggcgaagaactg
gtagttactcaacactccaagtcttttatcggaaaaatccccattatgctgagatcgact
tactgtttattgttcggtttgaatgatcgtgatttaacagagttaaacgaatgtcctctc
gatcctggcggttatttcattatcaacggttctgaaaaagtgcttatagctcaagaaaaa
atggctacaaatactgtttatgtattcagcatgaaagacggtaaatatgcatttaaggca
gaaatccgatcgtgtctcgaacattcatcccgtcctacttctaccctttgggtgaatatg
atggcccgtggtggccaaagtataaaaaaatctgcaatcggtcaacgtattattgccatt
ttgccatatattaaacaagaaatacccattatgatagtgttccgagcattgggtttcgtt
gctgatcgagacattttagagcacataatatatgactttgatgatccggaaatgatggaa
atggttaagccatcactagatgaagcttttgtcattcaagaacaaaatgtcgctctaaat
tttattggttctcgtggggcaagacctggggtgaccaaagaaaaacgtataaaatatgct
cgagaaattcttcaaaaagaaatgttgcctcatgtcggtgtttcagatttttgtgaaacc
aaaaaagcatatttcttgggatacatggtgcatcgtttgctgttggcttcacttgggcgg
cgtgaattggacgacagagatcattatggtaataagcgtttggatttggctggaccgtta
ttggctttcttgtttagaggtctatttaaaaatttaatgaaagaagtgcgtatgtatgct
caaaaatttattgatcggggaaaagatttcaatttagatttggctattaaaactaaactt
ataactgatggtttaagatattctttagctactggaaactggggagatcaaaagaaagcc
catcaagcgagagctggtgtgtctcaagtattgaacagacttacatttgcttcgacgctg
tctcatttaagacgtgttaattctccgattgggagagatggtaaactagctaaacctcga
cagctgcataacaccttgtggggaatgttatgtcctgctgaaacgccagaaggagctgct
gttggcttggtaaaaaatttggcactaatggcctacatatctgtcggatctcaaccttca
ccaatcttagagtttttggaagagtggagcatggaaaacttggaagaaattgctccgtct
gctattgttgacgcgaccaaaatctttgtcaatggatgttgggttggtattcatcgtgat
cctgaacaacttatgggtacgctcagaaaacttcgacgccaaatggatattatcgttagt
gaagtcagtattattcgtgatatacgcgaccgtgaaattagaatctatacagatgctggt
cgaatatgtcgtccgttgctaattgttgaaaatggaaaattattattgaagaaacgtcat
attgatagcttaaaagagcgtgactacaataattacggatggcaagttctcgtatctaac
ggtgtggttgagtatattgatactttagaagaagaaaccacgatgattgcgatgtcaccc
gatgatttgagacaagaaaaggaatttgcttactgtacgacttatacacattgtgaaatt
catcctgccatgatattaggagtgtgtgcatcgattataccgtttcccgatcataatcaa
agtccaagaaatacttatcaaagtgctatgggcaaacaagcaatgggagtgtatataaca
aattaccacgttagaatggacacgttggctcacgttctttattaccctcataaaccgctt
gtaactacaagatctatggaatatctacggtttagagaactcccagccggtatcaactcg
attgttgccattttatgttatactggctacaatcaagaagacagtgttatattaaacgct
tcggctgtggaaagaggcttttttagatctgtgttttaccgttcctataaagattctgaa
tctaaacgcatcggtgatcaagaagaagtgtttgaaaaaccaaatcgtgcaacttgtcaa
ggcatgaggaatgctatttacgataaattggacgatgacggtataatatcaccaggctta
agagtgtcgggagatgatgtaattattggcaaaacaatgacgcttccagataatgaagat
gaacttgaaggtaccaccaagaagttttcaaaaagagatgcgagtacgtttttaagaaat
agtgaaaccggtcttattgatcaagttttattgactttaaattccgaaggttataaattt
tgcaagattcgtgtacgatctgagagaatccctcagatcggcgataaatttgcctctagg
catggtcaaaaaggtacttgtggaatacagtacagacaagaagacatgccatttactagt
gaaggtgtgtctcccgacattataattaatcctcatgctataccctcgagaatgacaatc
ggccatttaattgagtgcttacaaggaaaagtatcggcaaataaaggagaaatcggtgat
gctacaccgtttaacgatgctgtcaatgtgcagaaaatttctactttactccaagagtat
ggttatcatctaagaggtaatgaagttatgtacaatggatttactggaagaaaaatcaat
gcccaaatatttttgggacctacttattaccaacgtcttaaacatatggtggacgacaaa
atacattcaagagctcggggaccggtccagattttagtgcgacagcctatggaaggaaga
gctagagacggcggtctacgatttggagagatggaacgagattgtcaaatcgcccacggt
gcagctcaatttttacgtgaacgtctatttgaagtttctgatccttaccgcatacatatt
tgcaatttctgtggtttaattgccatcgctaatttgagaaacaatactttcgaatgcaaa
ggatgcaaaaataaaacacaaatttcacaagtgcgattaccgtatgcagcaaaattacta
ttccaagaacttatgtccatgaatattgcacctagacttatggtgacaaactaa
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integrated database retrieval system
