Adelges cooleyi (spruce gall adelgid): 126839515
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Entry
126839515 CDS
T09500
Name
(RefSeq) transcription elongation factor SPT5-like isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126839515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoo03021
]
126839515
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126839515
Transcription machinery [BR:
acoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126839515
RNA polymerase I system
126839515
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
126839515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
Spt5-NGN
KOW
KOWx_SPT5
KOW6_SPT5
Spt5_N
KOW7_SPT5
KOW1_SPT5
GPKOW_C
CTD
DUF3912
Motif
Other DBs
NCBI-GeneID:
126839515
NCBI-ProteinID:
XP_050430816
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MSCSDDSIIDLSSESEAEEENDRQEYDDDAVVDEQNVEDVILVSEYDVSLEYDEEEDEEL
YERSGKKKKKVERYGGFIIDEAEVDDEVEEEDEWEEGPVDTSIVANEEDESGPTAREIEG
HRRGNDLWDSKNEDEIEEYLRRKYSDDTSVAIKHFGNAGVGLISEITKQTLLPGVKDPNL
WMVKCRIGEEKQTALLLMRKTIAYQFTDNPLQIKSAVSPEGVKGYIYIEAYKQTHVKSAI
ENISSLKMGIWKQQIVPINEMTDILKVVKIQSSFQPKQWVRFKKGYYKDDIAQVDYMNMA
QSNVHLKLIPRIDYTKLRGALRSTMGPDYLKRKRRRRPGAKLFDPEAVRAIGGEVTSDGD
FMVFEGNRYNRKGFLFKDFYINLISTEEVQPTLSELEKFEDATENEDIAVPIINTDNSAN
NQAISGGDNVEVCTGELINLRGKVLSIDGNMVTIMPEHKDLKLPLEFTANELCKYFKQGD
HVRVLGGRFKGDTGLVVRVTHKCVVMFSDVSMHEMEVLPRDLQLCKDTASGVDSIGQFQW
GDLVQLDLNNVGVIVRIEHEKVQVLSMTGKLIKAKSQTLLKKKEHKNTIGVDAHGNSLQR
KDVIKVIDGPHTGMQGEIQHLYRHHVFLYSRLMTNNGGIFVCRLRHVTLAGNSIDKSTSL
QNGSSTLGITSPRHIPGCPSGYGRYGGGVSYESRKFDGVRRDKELIGQTIRITSGPYKGA
VGMVKDSTECTARVELHSPCQTISVDKRNIMMVGGQQSKDRRTMPSSTKTSLNVVPMTPS
YREGGKTPMYGSMTPSYEVGSRTPAYGNMTPSHDTTISSLAWDPAAGYTPARDSDTDHSY
QLDHNYSPFEPESPSSCEFNGNNPFLNALSPTHVSPLNIDYHPRPSPSSYYPFLMTSSPS
SSPGPAAPFLTLFDLPSGWHTTGVYVHITDSELAAKTGIVKKVEDSTCTVYLPDNGQTVT
VDNEKLEPVMPKLNDFVKILCNQHKDKIGNMVAIEGSEGLVVLHDEKNPLLFPLVHLCRA
I
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcagcgatgatagcataatcgatttgtccagcgaatcggaggccgaagaagaa
aacgaccgacaagaatacgacgacgatgcggtcgtcgacgaacaaaatgtcgaagatgta
attctagtctccgaatatgatgtaagtttggagtacgacgaagaagaagatgaagagcta
tacgagcggtcgggaaagaaaaagaaaaaagtcgagcgatacggcggtttcatcatcgac
gaggcagaggtcgacgatgaagtggaagaagaagacgaatgggaagaaggtcctgtcgat
accagtattgttgccaatgaagaagacgaatcgggtcctaccgctagagaaatcgaaggg
cacaggcgcggaaacgatctttgggattcaaaaaacgaggacgaaatcgaagagtattta
cgtagaaagtattcggacgacacttcggtcgccatcaaacattttggaaacgccggcgta
ggacttatcagtgaaatcacaaagcagacacttttaccgggtgtcaaagatccaaatttg
tggatggtcaaatgtcgtatcggcgaagaaaaacagacagccttattgttgatgagaaag
acgattgcttatcaatttacagacaacccgttacaaatcaaatctgcggtgtcgcccgaa
ggcgtaaagggctatatttatatcgaggcgtacaaacagactcacgtcaagtcggcgatt
gaaaatattagcagtcttaaaatgggcatttggaaacagcaaatagtgcccatcaatgaa
atgacagacatactgaaagtcgttaaaatacaatccagtttccaacctaagcaatgggtt
cgatttaaaaaaggttattacaaagacgacattgcccaagtagattatatgaatatggcc
cagagtaacgtacacctgaaattgataccgagaatagattacacgaagcttcgcggcgca
ttgagatctacgatgggtccggattatctaaaaaggaaaaggaggagacgtccgggtgcc
aaactgtttgacccggaagcagtccgcgctatcggcggcgaagtgaccagtgacggggat
tttatggtattcgaaggaaatcgctacaaccgcaaagggtttctgttcaaagatttctat
atcaacctaatctcgaccgaagaagtccaacccacgttatcagaacttgaaaaatttgaa
gacgctaccgaaaacgaagacattgccgtgccaattataaacacagataattcagccaac
aatcaagccataagcggtggcgataatgttgaagtctgtacaggagaactgatcaatctt
cgaggcaaagtattgtcgattgacggaaatatggtcaccatcatgccggaacacaaagac
ctcaagctgccgttagagtttaccgctaacgaattatgcaaatacttcaaacaaggtgac
cacgtcagagtgttgggcggacgctttaaaggagacaccggactcgttgtacgtgtcaca
cacaagtgtgtcgtaatgttttccgatgtgtcgatgcatgaaatggaagttttacctcgt
gatttacaattgtgtaaggacacggcgtccggagtggattcgatcggacaatttcaatgg
ggtgatcttgttcagttagaccttaacaacgttggggttatagtgcgaatcgagcatgaa
aaagtacaagtactaagtatgacaggaaaattaatcaaagcgaaatcacaaaccctgtta
aaaaaaaaggaacacaaaaacacgattggtgtggacgcgcatggcaattctttacaaagg
aaagatgtgatcaaagtcatcgacggaccacacacgggaatgcaaggagaaatccaacat
ctttatcgtcatcatgtatttttatactctcgcctgatgactaataacggagggattttc
gtatgtcgattaagacatgttacgttggctgggaattcgattgacaaatcaactagcctg
caaaatggatcatcaaccctgggaattacatctcctcgtcatatacccggttgtccgtcg
ggttacggcagatacggtggcggcgtcagttacgaatcgagaaaatttgatggcgtacgc
agagacaaagagctgattggacaaacaatacggatcaccagcggtccgtacaaaggagct
gttggcatggttaaagactcgaccgagtgtacggctagggtcgagctgcattcgccttgt
caaaccatatcggtcgataagagaaacatcatgatggtcggcggacaacagtccaaggac
aggagaacaatgccgtcgtccaccaagacatcgctgaatgttgtccccatgacgcctagt
taccgcgaaggaggcaagactcccatgtacggatcgatgacgcccagctatgaagtcggt
agtcgtactccggcctacggtaacatgacaccttctcatgacacgacaatctcttcacta
gcgtgggatcccgcagcgggatatactcccgccagagacagcgacactgatcactcgtac
caattggatcataactattcaccgtttgaaccagaatctccgtccagttgtgaattcaat
ggcaataaccccttcctaaacgcattgagccctacgcacgttagtccgcttaatatcgac
tatcatccccgtccgtcaccttcatcttattatccgtttttgatgacctcgtcaccgtca
agttctcccggacccgcggctccttttttaacgttgtttgacttgccatctggttggcac
actactggtgtttacgtccatataactgattcagaactagccgcaaagactggaatcgtt
aaaaaagtagaagacagtacatgcactgtgtatttaccggacaatggacaaacggtaaca
gtcgataatgaaaagttggagcctgttatgcccaaattgaatgattttgtaaaaatactg
tgcaatcaacacaaagacaagataggaaatatggtggccatagagggcagcgaaggattg
gtcgtgttgcatgacgaaaaaaacccattactttttccactggtgcatttatgtcgagcc
atttaa
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integrated database retrieval system
