Adelges cooleyi (spruce gall adelgid): 126840213
Help
Entry
126840213 CDS
T09500
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03440
Homologous recombination
acoo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126840213
03450 Non-homologous end-joining
126840213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoo03032
]
126840213
03400 DNA repair and recombination proteins [BR:
acoo03400
]
126840213
DNA replication proteins [BR:
acoo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
126840213
DNA repair and recombination proteins [BR:
acoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
126840213
BRCA1-C complex
126840213
NHEJ (non-homologous end-joining)
MRX complex
126840213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_15
AAA_29
ABC_tran
AAA_22
AAA_13
AAA_16
Motif
Other DBs
NCBI-GeneID:
126840213
NCBI-ProteinID:
XP_050431772
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MWSVNTQPVITDNRLSNMSTLNKISIQGIRSYHPDERQTIEFQKPLTLILGENGCGKTTI
IECLKYATCSDQPKNTKNGGFVWDPKLSDHVTVKGQVKLYFNDTKNSSVVVSKTLESTQK
QKVTTKTLDQTISINGKSASHKCADIDEIMCTYLGVSKPILKDVIFCHQEDSNWPLDEDK
KLKEKFDSIFDVGKYDKCIDQIRREIKTVHEDQKISKNNIQFKKKIRDEARDKKATLDDR
KTKLEIIRNDIAKIEEECIPLDTRIKEISNFESQLSIHQGGLKCFEQQLMYIQEAQIGLK
NEIKSEFKGNDQQLEEELSNFDNNLIQKEREKQELENEKQEASYNENNLQVKINKQEIKR
GQYLNEEKQHMSNIQNQNQNLTKLAQDLNIDLNDKVSESTQTQVIDKITNSLKNMNNVLE
STQNQYRQVEHELQLQIDETRERKAKLEHEIHMKEKQIKETGVDIKNTKEAVEEVKHSAN
RLGVLKNEMVEIDKKLEELNRSLDVNNIKKCIEEKHNEKTSLEAKQKDIDKEVQTLQLLS
IEQAELNTIRSNKSGIENKLQILKNKVNHVLVNLLGFIPKSNLKYEFNSALEKLTSTIKS
NRKSITEIQKKLTTLEANHKHKVENIRTKQRMLSDDENAAYEMCQGQDYDTILKEVNEKV
EELQDLKGSVSTSGHLFKRYIAKLQAEKPCCPLCHRGFGSVDDVTELINDLNMRVQQIPD
ELDNTVGQLEIYLEKQSKLQQMMPVCTRISVLKETEIPNLKKELESIEFNLKKCREELTV
VSENNVKLETDESNAKVIQSDITLIDNYINETARLEEKEQLLVAKISKSGSSRNLHEALS
EQSSIRSTLSAVCKNIENNGSVLVKYNENLHELQQKKNMVTTEELKIKSSVQAEKGLMEK
LIDLQSLETTLNVELNEARSALEPIKSNLILYASKLEQTKKKHILQIEQDGKKIKMLEQN
FDNIKRLQISIDDYKKNYYSQRIQDINDLMEKLKKEKQDYSNVQLQIQKKIDFIKEFNTN
QKMQKFDLENNKKLRNKMKEEIECINEIQNLKTLIGDTDINILLKEKKKVVQKIESLHTQ
KNVSRGRQLELNTGITKIMNELMNPDYKDAEKNYLHELVHFEVLNKVEKDLEKYWRALDA
TLQMFHKGRMQSINAIIKELWANIYNGNDIDYIEIKTSDDNVKPIQTETTKRRIHNYRVV
QWKNGTELDMRGRCSAGQKVLACLIIRMALAETFSKNCGILALDEPTTNLDEPNITNLAD
SLSHIVARRSCQRSFQLIIITHDPNFLRKLSASDKVDKFYNVKRSPKGMSIVQEKEIAYL
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtgtgaacactcaaccggtgattactgataatcgattatcgaacatgtctact
ttgaataaaatatcaattcaaggcattaggagttaccatccggatgaaaggcagactatt
gaattccaaaagccgttaactttgattttgggtgaaaatggttgtggaaaaactacaatc
attgaatgtctcaaatatgctacatgttccgatcaaccaaaaaatacaaagaatggtggt
tttgtgtgggatcctaaactctcagaccatgtgactgtaaaaggtcaagtaaaattgtac
tttaatgacacaaagaattcatcagtggttgtatcaaagactttagaatctactcaaaag
cagaaagtcactaccaaaaccttagatcaaactatttctataaatggaaagtctgcgtct
cataagtgtgcagatattgatgaaataatgtgtacatatttaggagtttctaaaccaatt
ttaaaagatgtaattttttgtcaccaggaagattcaaattggcctcttgacgaagacaag
aaattgaaagaaaaatttgattcgatatttgatgttggaaaatatgataaatgtattgat
cagatccgtagagaaattaagactgttcatgaagaccaaaaaataagtaaaaataatatt
caattcaaaaagaaaattcgagatgaagcgcgtgataaaaaggctaccttagatgacagg
aaaacgaaattggagattatacgcaatgacattgccaaaatagaagaagaatgtattcct
ttggatactagaattaaagaaatttctaactttgaaagtcaattgtcaatacatcaaggt
ggattaaaatgctttgaacaacaattaatgtatatacaagaagctcaaataggtttaaaa
aatgaaattaaatccgagttcaaaggaaatgatcaacagctcgaagaagaattatctaat
ttcgataataacttgattcaaaaagaaagggaaaaacaggaattagaaaatgaaaaacag
gaagcatcatacaatgaaaataatcttcaagtaaaaataaataaacaagaaatcaaacga
ggacagtatttgaatgaagagaaacaacatatgagtaatatacaaaatcaaaatcaaaat
ctgactaaactagctcaagatttgaatattgatttaaatgataaagtatcagaatctacc
caaactcaagtaattgataagattacaaattctttaaagaacatgaataatgttctggaa
tcaactcaaaatcaatacaggcaagttgagcatgagttacaattgcaaatcgatgaaacg
agagagagaaaagcaaaattagaacatgaaatccatatgaaagaaaagcaaattaaagaa
actggagttgacattaaaaataccaaagaagccgttgaagaagtaaaacattcagctaat
agattaggtgttttaaagaatgaaatggtggaaattgacaaaaaactagaagagctaaat
agatcattggatgtaaataatattaaaaaatgcatcgaagaaaagcataatgaaaaaact
agtttggaagcaaaacaaaaagatattgataaggaagtacaaactttgcaacttttgagt
attgaacaagcagaacttaatactataaggtcaaataaatctggaatcgaaaataaactt
cagatacttaaaaacaaagtgaatcatgttcttgtaaacctactcgggtttataccaaag
agcaacctaaaatatgaattcaattcggctttggaaaaattgactagcacaataaaatcc
aaccgaaaatctattactgaaatacaaaaaaagttgacgactttagaagctaaccacaag
cataaagtagagaacatacgtacaaaacagaggatgctttctgacgatgaaaatgccgcg
tatgaaatgtgtcaagggcaagattatgatacaattttaaaagaagtcaatgaaaaagta
gaagagttgcaagatctcaaaggttctgtatcaacttcaggccacttatttaaacggtat
atagcaaaacttcaagctgaaaaaccatgttgtccgttgtgtcatcgaggctttggatca
gttgatgatgttactgaactgataaatgatctgaacatgagagtccaacaaattcctgat
gagttggataacacagttggtcagttggaaatatatttagaaaagcagtcaaaattacaa
caaatgatgcctgtttgcactcggatttctgttttaaaagaaactgaaatacccaatctt
aaaaaagaactagaaagtatcgagtttaatttaaaaaaatgtcgggaagaactcacggtg
gtgtctgaaaataatgtcaaactagaaactgatgaatctaatgctaaagttattcaatcg
gacataacattgattgataattatatcaatgagactgctcgtctagaagaaaaagaacaa
ttgttagtagcaaagattagtaaatcgggatccagtagaaatctccatgaagcgttatct
gaacaaagctccatcaggtctacattgtctgctgtttgtaaaaacatagagaacaacggt
tcggtgttagttaaatataatgaaaacttacacgagcttcaacaaaagaaaaacatggtt
acaactgaagaattaaaaataaaaagtagtgttcaagctgaaaaaggcttaatggagaag
ttaatcgatctacaatctctcgaaacgacactaaacgttgagttaaacgaggccaggagt
gctcttgaaccgattaaaagtaatctaattttatatgccagcaaattagaacaaacaaag
aaaaaacacattttacaaatcgaacaagatggaaaaaaaataaaaatgctagaacaaaac
tttgataatattaagcgcttgcaaatatcaattgatgattacaagaaaaactattattca
caacgcattcaggatattaatgacttgatggaaaaactaaaaaaagaaaaacaggattac
agcaatgttcagttgcaaattcagaaaaaaatagattttattaaagagtttaacaccaat
caaaagatgcaaaaatttgatttggaaaacaataaaaagcttaggaataaaatgaaagaa
gaaattgaatgtataaatgaaatacaaaatttaaaaacacttattggagacaccgacata
aatattttattaaaagaaaagaaaaaagtggtacaaaaaatagaaagtttacacactcag
aaaaacgtttctagaggtaggcagttagagttaaatactggtataacgaagatcatgaac
gaactaatgaatcctgattacaaagatgcagagaaaaattacttgcacgaattggtacac
tttgaagtattaaataaagtggaaaaagatttagaaaagtattggagagctctcgatgct
actttgcaaatgtttcataaaggtcgcatgcaaagtatcaacgctattattaaagagtta
tgggcaaatatctacaatggcaatgacatagattacattgaaattaaaacttccgatgac
aatgtcaaaccaatacaaaccgaaacaaccaaaagaagaattcacaattatcgagttgta
caatggaaaaatggtactgaattagacatgcgcggccgatgtagtgctggtcaaaaggtt
ttagcatgtttgattataagaatggctttagccgaaacgttcagtaaaaactgtggtata
cttgctctggatgaacctacgacaaatttagatgaaccgaacataacaaacttggctgat
tcgttatcgcatatagtggctcggcgtagttgtcaacgatcttttcaattaattattatt
acacacgatccaaatttcttgcgcaagctatcagctagtgacaaggttgataaattctat
aatgtaaaaagaagtcccaagggtatgtcaattgtacaagaaaaagaaattgcatactta
tcgtaa
DBGET
integrated database retrieval system
