Adelges cooleyi (spruce gall adelgid): 126840545
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Entry
126840545 CDS
T09500
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoo03009
]
126840545
Enzymes [BR:
acoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126840545
Ribosome biogenesis [BR:
acoo03009
]
Eukaryotic type
90S particles
Helicases
126840545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
HEM4
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
126840545
NCBI-ProteinID:
XP_050432332
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MDSFDIFKKLSVGAKFKKPPRVMLDENEKSKEKQIKIKTVGNNVPVLLSTFENMKTTYSL
SPVLIENIFKSGYNEPTPIQSQAIPIMLQNRQIFACAPTGSGKTAAFLVPIIHHLKKPMN
TGIRALIVSPTRELAKQTFRECMRLCEGIGLRAQTFTKITKDKEKFNPKTTQKFDILIAT
PNRLVFLLQQDPPSVELNNVEWLVIDESDKLFETGVRGFRDQLATIYKACGPSTKRAMFS
ATYTVEVAKWSKKNLDGLISVSVGNRNTTATTVKQDLVFVGNEEGKLIAMRDLVKKGLSP
PVLIFLQSKERAKELFSELIYDGINVDVIHADRTQQQRDNTVKAFREGKIWVLICTELMG
RGIDFKGVNLVINYDFPSSAISYIHRIGRTGRAGRPGNAVTFFTNDDKPMLRSIATVMKD
SGCPVPDYMLEMKKLHKNTRRKLEKQSINRDEIRAKPHRYHKPTKIDKNDSKSEDESVNG
KGNIAKSKKPVKNKVSTKHNLKNEDTIKLVAIKGKRKLDDSKKQKNKKRLKTTV
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggattcatttgacatttttaaaaaattatctgttggtgccaagtttaaaaaaccgccg
cgtgtaatgctggatgaaaatgaaaagtcgaaagaaaaacaaataaaaataaaaaccgtg
ggtaacaatgttcccgttttgttgtcaacattcgaaaacatgaaaacgacgtattctttg
agtccggtcttgattgaaaacatttttaagtctggttacaacgaaccaacacctatacaa
tctcaagcaataccaatcatgttacaaaacagacagatatttgcttgtgcaccgactggg
tcaggtaaaacggctgcgttcttggtacccattatacatcatttgaaaaaacctatgaac
actggaatccgagcgttaattgtcagtcctaccagagagttagctaagcaaacgtttaga
gaatgcatgagattgtgtgaaggtattggactgcgagctcagacatttacaaaaatcact
aaagataaagagaaatttaatcctaaaactacacaaaagtttgatattttaatagcaact
cccaatcgtctagtgtttttattgcagcaagacccaccatccgttgagctaaacaatgtt
gagtggttggttatagacgagtcggataaactgtttgaaactggtgtgaggggattcaga
gatcaactcgcaacaatatacaaagcgtgtggtccaagtacaaaaagagctatgtttagc
gctacatatactgtagaggtagcaaaatggtctaaaaaaaatcttgatggtctaatatcg
gtgtcggttggtaatagaaacactacagccacaacagttaaacaggatttagtatttgtt
ggaaatgaagaaggcaagttaattgcaatgagagatcttgttaaaaaaggattatcgcct
ccagttttgattttcttgcagtctaaagaacgagcaaaagaactatttagtgaactaatt
tacgatgggattaatgtagacgtaatacacgctgatcgaactcaacaacagcgggacaat
actgtaaaagcctttcgcgaaggaaaaatttgggtattaatttgtaccgagttgatgggt
cgaggtattgactttaaaggagttaacttggtaataaactatgactttccttcttctgcc
atttcttatattcatcgaattggacgaactggcagagctggacgtcctggcaacgctgtt
acattcttcaccaacgacgataaacccatgcttagaagtattgctactgtcatgaaagat
tcagggtgtccagttccagattacatgttggaaatgaaaaaattacacaaaaataccaga
agaaaattagaaaaacagtccattaatagagatgaaattagagcaaagcctcataggtat
cataaacctacaaaaatagataaaaatgattcaaagtctgaagatgaatctgtaaatggt
aaaggaaacattgccaaatcaaagaaacctgttaaaaataaagtatcaacaaaacataat
ttaaaaaatgaagatacaattaaattggttgcgataaaaggaaaaagaaaactagacgat
tcaaaaaaacaaaaaaataaaaaaaggttaaaaactactgtctag
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