Adelges cooleyi (spruce gall adelgid): 126841329
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Entry
126841329 CDS
T09500
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoo03009
]
126841329
Enzymes [BR:
acoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126841329
Ribosome biogenesis [BR:
acoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
126841329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
AAA_19
DUF6827
AAA_11
Motif
Other DBs
NCBI-GeneID:
126841329
NCBI-ProteinID:
XP_050433695
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MESKVNFHEMDIDDRILKAIANNGWTEPTLVQERAIPLMLEGKDMLLRARTGSGKTAAFV
IPVLQKILKSKELNPDQYNTKALILAPSKELCNQIYKNILQLAMKCSRIICCVDISGQID
MKEQKPLLITPPDIIVSTPARALLHLQAKNISLDDLQTIIVDEADLVFSFGYEEEIKETV
KYLPKVYQAVLASATLSENVLELKKLLLHNAVILKLQEPDLAPLSQLTHYKLNAQEEDKA
VILYCCFKLKLVKGKTIVFVNTVDKCYKLKLFLEQFGIHTCVLNSELPASCRYHTICQFN
DNVYDIIIASDEKFMDEEQTKEETTNQTSKRKHDKEFGVARGIDFQFVSVIINYDFPLDV
YSYIHRVGRTARGKNKGTAISFCNIREQNMLNDVEKYIKQGTSEKNDVFLPFNFKLEEVE
GFRYRAKDAWRAVTKIAVREARLKEIKHEMLNSKKLKRYFQENPRDLLSLRHDKALHTVK
LQDHMADVPDYMVPASLKEFLHTQQEEDENVKNSRKKDKDYYKKLQSGYKKYQTKKKNPL
VGMEYTGLKKM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaatctaaagttaattttcatgaaatggacatcgatgatcggatactcaaggctatt
gctaataacgggtggacagaacccacattggtgcaagaacgagccattccgcttatgtta
gaaggcaaagacatgttgttaagagcaaggacgggatctggtaaaaccgcggcatttgta
ataccagtattacagaaaatattaaaatccaaagaattaaatccggatcagtataacaca
aaagccttgattctggctccgagcaaagaactctgtaatcaaatttataaaaatatactt
cagttagcaatgaagtgctctagaataatttgttgtgtagatatatctggacaaatagat
atgaaagaacagaagccgttattgattacaccgcctgacataattgtgtccactccggca
agagcgttgcttcatttgcaagccaaaaatatatctctcgacgatcttcaaacgataatc
gtcgacgaagcggatttagttttttctttcggttacgaagaagagattaaagaaacagtc
aagtatttaccaaaagtctatcaagcggtgttagccagtgccacactctctgaaaatgtt
ttagaattaaaaaagttgttattgcacaatgctgttattttgaaattacaagaaccagac
ctggcaccgttatcacagttgacgcattataaactcaacgcccaagaagaagacaaagct
gttatattgtattgttgtttcaagctgaagctcgtcaaagggaagacgattgttttcgtc
aatacggtcgataaatgttacaagttgaaattgtttttggaacaatttggcattcatact
tgtgttttgaattctgaacttcctgctagctgtcgttatcataccatttgtcagtttaac
gataacgtatacgacataattattgcgtctgacgaaaaatttatggacgaagaacaaacg
aaagaagaaacgaccaaccaaactagcaaacgtaaacacgataaagaattcggagtggcc
aggggaatcgattttcaatttgtgtccgttataatcaactatgattttccattggacgta
tattcttacattcacagagttggtcgcacagccagaggtaaaaacaagggtacggctatc
tcattttgtaatattagagaacaaaatatgttgaacgatgtggaaaaatatataaaacaa
ggtacatcggaaaaaaatgatgtatttcttccgttcaacttcaaactcgaagaagtcgaa
ggattcagatatcgagcgaaggacgcttggcgagctgtcactaaaattgcagtgcgagag
gcccgtcttaaggaaatcaaacacgagatgcttaactctaaaaaacttaaaaggtatttt
caagagaatcctcgagatttattgtcgttaaggcacgataaagcattgcacactgtgaaa
ctacaagaccacatggctgacgttcctgattatatggttccggcatcgttaaaagaattt
ctacacacgcaacaagaagaagatgagaacgtgaaaaattcgagaaaaaaagacaaagac
tattataagaaattacaatcgggatacaaaaaatatcaaacgaaaaaaaagaatccttta
gtcggaatggaatatactggattaaaaaaaatgtaa
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