Adelges cooleyi (spruce gall adelgid): 126841363
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Entry
126841363 CDS
T09500
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126841363
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
126841363
3'-5' decay
Other 3'-5' decay factors
126841363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
TFIIA
PAM2
AAA_22
ResIII
AAA_18
Helicase_RecD
AAA_14
zf-CCCH
VPS13_N
zf-C2H2_4
zf-C2H2_3rep
AAA_24
Motif
Other DBs
NCBI-GeneID:
126841363
NCBI-ProteinID:
XP_050433752
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MEINFGEIEHRAIEYLNLKQWNNAFFCFDQLLDGALAKSLPSDRLVGYLLGRSQCNLEMK
KFEAVVIDCHTILTMLTTEEEAYSTRVRRNLVNALFALRRFAEAENVAFEWMLRAENNAE
AKRMIDTIQCVCTEPPKVTPHPAQSLEEQFNQINEDLLFGDLDSWIATGEREQSRRNRKH
PVELVDDGNRAQQFLDSIHINTNEIGLHNGGRLYQRFNGNGHENGVLFSEPINHNVVVGY
GTSKGTEDFDESSEDKQMEIKFSKKSITRYSCTYCGLSFDLENQLRAHCATEFHQTVIMS
DEGRDWKWRPPPRGHSSESYTLCEAFMDGDGAEGSCKDGAQCVEAHGIDELTEWKERFDY
RRMKLKRAKENKLYGKSYTEQLLERWVQATNPEKVMRESLENVVETHDCDLVTTVESKTS
SREWTFTLETLSPLQAVALLQDTYRNHFSLTNILVDNGLQKIEFDMEHPNNQEWVSQAQH
PVSQSLSSKFKHQVKVFFSTNIYGTFRQSVVFDLGLGPVLVKHLCVDVIPVTDCGKVKEI
HREIVLSSMERWSASNSKIVEFSTLIGPVPVKEDKEREQKLLSSYPAPCPSTFSLTHTTI
SEKKLTRNNYRARIHELLYVEELARYEQVARYNLTAKLQLASCYLLSPSGVGASTAKYSH
NNELFALLQLGTDVSEDTSAGRLILNNCTTVYLSPSKGSKSTEKKRTVHEAQIEDKGKNV
IYLRLSANSVTSLNLKASTSVKFDVQFQLNRIPYCEWHYAIDHIADFKIIFPDTFLEPII
PWSPKRQWIDIIDKKLNVKQREAVIAITTPTNISLPPILIIGPFGTGKTYTLAQAIKQTL
FQDNTRILVCTHSNSAADLYIKDYLHPHVEEGHPEAKPLRIYYHKRWVSTVHSTVQKYCI
LDENNAFRLPTLEEILNYRVIVVTLSISMFLSSIGLKKGHFTHILLDEAAQAMECEAIMP
LALANTDTRIVLAGDHMQLSPEIFSKFAKERNLHVSLLERLYDHYPGLFACKILLCENYR
AHEAIIHFTSELFYEQKLVSKGNQPRHDKLYPLTFFTTRGEDIQDSNSTAFYNNAEVYEV
VERVCELRKNWPTAWAPFDEHSIGIMTPYSDQVFRIRSELRKRRMGGISVERVLNVQGKQ
FRAIFLSTVRTRRTCVSNNVSGGEKSNNDSGKLGMDDMDYGFLSNSKLLNTAITRAQSLV
AVVGDPVALCSVGRCRKVWERFIQICEDNHSLNGITWMNLRNLLDNLELKKSYVLNPLAP
EFVPRRYQQESYIKIPQSLTSFNAAVPPPPLRFSQPPPLYSSPIFPIPLYIPSIAQPPPP
TFISLRQPIINPTQMWPLGPLAPPQNLFHRPMLQQPIQKLHEEEVRPPPGLLPPRNPPGL
VHMVQNGHTDFQFVQNAGIAPVNLPSPNMIVPNPSLMGFHESFNKINISPIPPFPMQHPS
LVQPYVRTVVDVNNKHNEAITMQQQQHQPQTQRASDRSILEAMLPQGVSIEEMASSQTRQ
LEWMKFITDNGGASMAQKFIELLRSQSCKKPIVQQQSAVPVQMNMPPSELGNRMPEDMFN
VLMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQPQPQKQQINGLGNQMQIAQS
IGENGSADDDVYKSLSQQMTLSQQQLMCIDQFDRMPLYKRQPQQQPDGSVLLPVDGDRQP
VLPSQFQGASGMASYADACRQSPMVDEQNGNPVADGKYTNDASSMHQNNAFYNFFNS
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaatttcggcgagatcgagcacagggccatcgagtacttgaacctcaagcaa
tggaacaacgcgttcttttgcttcgaccagctgctggacggcgccctggccaagagcctg
ccgtccgaccgcctcgtcggctacctgttaggccggtcgcagtgcaatctggaaatgaaa
aagttcgaggccgtcgtcatcgactgccacaccatattgaccatgttgaccactgaggag
gaggcgtacagcacgcgcgtccgccgcaacctggtcaacgcgctgttcgcgttgaggagg
ttcgccgaagccgagaacgtagcgttcgaatggatgttgcgcgccgagaacaacgccgag
gccaagcgcatgattgacaccatacagtgcgtgtgcacggaaccgccgaaggtcacgccc
catccggcgcagtcgctggaagagcagttcaatcagatcaacgaggacctgctgtttggc
gatttggactcgtggatcgcgacgggcgaaagggagcaaagcaggagaaacagaaaacac
ccagtcgagttggtggacgacggaaatagggctcagcagtttctagatagcatacacatc
aacaccaacgaaattggtctccacaacggcggtagactctatcaacgattcaacggtaac
ggtcatgaaaatggggtactgttttccgaaccaataaatcacaatgttgttgtcggttat
ggtacgtcaaaaggcaccgaagactttgatgaatctagtgaagacaaacaaatggaaatt
aaattttcaaaaaaatccattacgaggtattcatgtacatattgtggcttatcgttcgat
ttagaaaatcagttgcgagctcattgcgccactgaattccatcagacagttattatgtcg
gatgaaggacgcgactggaagtggagaccgcctccaagagggcactcgtctgaaagttat
acgttatgtgaagcgtttatggacggcgatggagccgaaggttcctgcaaagatggagct
cagtgtgtcgaagcacacggcatagacgagttgaccgagtggaaggaaagattcgattat
cgaagaatgaaattgaaacgagcaaaggaaaataaattgtacggcaagtcgtacaccgaa
cagctgttggaaaggtgggtgcaagcgacaaatcctgaaaaagtcatgcgtgagagttta
gagaacgtcgtagagactcacgactgtgatctggtcactactgttgagtctaagactagt
agccgcgaatggacgtttacattggaaacgctgtcgcctctacaggccgtcgctctactc
caagacacgtatcgtaaccatttttcgcttaccaacattttggtcgacaatggattacag
aaaattgaattcgacatggaacaccccaacaaccaggaatgggtgtcgcaagcacagcat
cctgtctcccaatcgttgtcttccaagttcaaacaccaggtcaaagtatttttttccacc
aacatttacggaacattcaggcagtctgttgttttcgatttgggtctcggcccagtgttg
gtgaagcatctctgcgttgacgttatacccgtaacggattgcggtaaagtcaaagaaatc
caccgagaaattgtactgtcatcgatggaacgatggagtgcgtcaaattcgaaaattgtt
gaattcagcacgttgattgggccggttccggtcaaggaggataaagaaagggaacagaaa
ttgttatccagttatccggcaccgtgtccgtcgacgttttcattgacacacaccactatt
tctgagaaaaaactcacgagaaacaattacagagcgagaattcacgagttgttgtacgtt
gaagagttggctcgttacgaacaagtggctcggtataatttaactgcgaaattgcaattg
gccagctgttatctgttatctcctagcggcgtcggagccagtacggccaaatattcccac
aacaatgagttgtttgctctattgcaactcggaactgacgtttctgaagatacgtccgcc
ggacgattgatattaaacaattgcaccactgtgtacctttccccgtcaaaaggttcgaag
tcgacagaaaaaaagcgtacagttcatgaggcgcaaatcgaagacaagggcaaaaatgtt
atctacctcagattgtcggccaattcggtgacaagtctcaacctcaaggccagtacaagt
gtgaaattcgacgtgcagttccagctgaatcgtataccttactgcgaatggcattacgct
atcgaccacattgccgattttaaaattatttttcccgacaccttcctggaaccgatcata
ccgtggagtccaaagcgacagtggatcgatataatcgacaaaaaactcaacgtcaaacaa
agagaggcggtcatagccatcacgactcctaccaacatcagcttgcctccgatactcata
attggtccgtttggcacgggtaaaacgtataccttagcccaagcgatcaaacagacgttg
ttccaagacaacacgagaattttggtgtgcacccattccaatagtgctgcggatttgtat
attaaagactatctgcatccacacgtcgaagaaggacatcccgaggccaaaccattgaga
atatactaccacaaacgatgggtgtcgacagtacacagcacggtccaaaaatattgtatt
ttggatgaaaacaatgcatttagactaccgacgcttgaagaaatattaaattatcgagtc
atagtagtgactttgagcatttccatgtttttgtcatcaatcggtttaaaaaaaggacat
tttactcatattctgttggacgaagccgcacaagcaatggaatgcgaagcgataatgccg
ttggctttggccaacacagacacacgtatcgtgttggctggagatcatatgcagttgagt
ccagaaatattttcaaaatttgcaaaagaacgcaatttacacgtatcgctgctggaaaga
ctgtacgaccattatccaggattgttcgcttgtaaaatattgttgtgcgaaaactacagg
gctcatgaggctattatacattttacgtccgaattgttttacgaacaaaaacttgtgagc
aagggtaatcagccgcggcacgataaactgtatccgctgacgttcttcacgactcgcggt
gaagacatacaagacagcaactcgacggcgttctacaacaatgccgaagtgtacgaagtc
gtggagcgcgtgtgtgaactgagaaagaactggccaacggcgtgggcaccgttcgacgaa
cattccatcggcataatgacgccctactccgatcaagttttcaggataaggtcggagctg
cgtaaacgtcgaatgggcggcatatccgtcgagagggttttgaacgttcaaggaaaacaa
ttcagggcgatatttttgagcacggtgcgaacacggcgaacttgcgtttcaaataacgtc
agcggaggagaaaagtcgaacaatgactcgggcaagctcggaatggacgatatggactat
ggatttttgtcaaattctaagttgttgaacactgccattactcgggcccagagtctcgtg
gccgtggtcggcgatcctgttgctctttgttccgtcggacgatgcagaaaagtttgggag
cggttcattcaaatatgcgaggacaatcacagtctgaacggtatcacttggatgaactta
cgaaacttactcgacaaccttgaactcaagaaatcgtacgtgctcaaccctttggcaccg
gaattcgttcctagacgataccaacaagagtcgtacataaaaattccacagtcgttgaca
tcgttcaacgccgctgttcctccgcctccgttgaggttcagccagccgcctccgctgtat
tcttcgccaatatttccaatccctttgtacataccttccattgctcagcctccgccgcca
acttttatatcgctcagacagccgatcataaatcccacccaaatgtggcctctggggcca
ttggcaccccctcaaaacctattccacagaccaatgttacagcaaccgatacaaaagctg
cacgaagaagaagtacgacctccgccgggcttactaccacccagaaatcctcccggactc
gtgcacatggtgcagaacggtcacaccgacttccagtttgtacaaaacgccggaatcgct
cccgttaatcttccgtctccaaatatgattgtgccgaaccctagtctaatgggatttcat
gagtcttttaacaaaattaatatttctccgataccaccatttccaatgcaacatccgtct
ctggttcaaccgtacgtgagaactgtagtagacgtgaacaacaaacataatgaagcaatt
acgatgcaacaacaacaacatcaaccgcagacacaacgcgctagcgatcggtcgatactt
gaggccatgttaccgcaaggtgtgagtatagaggaaatggctagttcccaaacgagacaa
ttggaatggatgaagttcattacggacaatggcggcgcttcgatggcacaaaaatttatc
gagttgttgcgatcgcaatcgtgtaaaaaacccatcgttcaacaacagtctgcagtaccc
gtgcaaatgaatatgccgccgtcggaactgggcaacagaatgcccgaggacatgttcaac
gttctaatgcagcaacaacaacagcagcagcaacaacaacagcagcaacaacaacaacag
cagcaacaacaacagcagcagcaacaacaacaacagcatcagcaacaacaacaacagcaa
ccacaaccacagaaacagcaaatcaacggtttgggcaatcaaatgcagatagcccaatca
ataggtgaaaatggaagcgccgacgacgacgtttacaaatctttgtcccagcaaatgact
ctcagccaacaacaattgatgtgcatcgatcagtttgaccgcatgcctctgtacaaaaga
cagcctcagcaacagcccgacggcagcgtactgttgcccgtcgacggcgatcgccagccc
gttttgccgtcgcagttccaaggagccagcggtatggcgtcttacgcggacgcttgtaga
cagtcaccaatggtcgatgaacaaaacggaaatcccgtagccgacggcaaatacacaaac
gacgcgtcgtccatgcatcaaaacaatgcgttttataacttttttaattcttaa
DBGET
integrated database retrieval system
