Adelges cooleyi (spruce gall adelgid): 126841374
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Entry
126841374 CDS
T09500
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03015
mRNA surveillance pathway
acoo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126841374
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126841374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126841374
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
126841374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
126841374
NCBI-ProteinID:
XP_050433769
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MTKMADGVDIDLYADDLEQDFAQEEFSGNDNVDLYDDVISGTNDSTQTRQVESSPSSNSQ
SSTPLVTNGSSNNSTTSNNTTTGRRYQLYIGNLTWWTTDQDITDSVTSIGVSDFIEVKFF
ENRGNGQSKGFCVVTLGSEHSLRLVMDRLPKKELHGQSPVVTFPTKQALLQFESQSKTRP
LPPPNNQNMPAMGMSRAPGQVMQQPMRGPMIPQQPMMQQQGMRPRMPMQGMQQNPQGMQP
PMGMTNGHRMPMQPGGPMGPHQQGPPPPGYQNQWNGPNQQMGPPRPGMPPQGPVGQPRGP
PPGMFPPGQGPPRMGPPQGPQGPQGPGGPRTDWNRPPGMPPHQMAPPGSGFAPHQQGPPM
QGPPPGQGPVQMMQGGPGQAPAPHVNPAFFQQPTGAPQGPPGHPGYGPPNGGATSRPYMA
NDMGMSEQELEEIMSRNRTVSSSAIARAVADAAAGEYSNAIETLVTAISLIKQSKVANDE
RCKILVSSLHDTLHGIETKSYSSRRERSRSPRDRLHRRSRRERSRSRERDYRDRSRERDR
DRERDRDKYVDRYVDRYYATDRDGDRDRERERDREYRERSREDSLLFNSSVKASSRSRKI
TPPDVTESVPVSSKSRYYDDRYRERERDRDRERDRDREREREPVSSRRAVDPDRDIERER
DRREDRAESSHRSSRH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatggccgacggcgtggacatcgatttgtacgccgacgacttggaacaagac
tttgctcaggaagaattttcgggaaatgacaatgtggacttatatgatgacgtcatatct
gggaccaatgatagtactcagacaagacaagtagaatcgtctcctagttcaaacagccaa
agtagtactccgttagtgacaaatggctcgtctaataatagtaccacaagtaataatact
acaactggacgcagataccaattgtatattggaaatttaacatggtggactaccgatcaa
gacataacagacagcgtgacaagcataggtgtttcggatttcatcgaagtgaaattcttt
gaaaatcgaggcaatggtcaatctaaaggcttttgcgtcgtcactctgggatcggagcac
agtttacggctggtcatggacaggctgccaaagaaggaacttcacggacaatcgccggtc
gtcactttcccaaccaaacaagcacttttgcagtttgaatcgcagtctaaaactcggcca
ttacctccacctaataatcagaacatgcccgccatgggaatgtcgagagctcccggtcaa
gttatgcagcaacccatgcgcggacccatgatcccgcagcagcccatgatgcagcaacaa
ggcatgagacctagaatgcctatgcagggtatgcaacaaaaccctcaaggaatgcagccg
cccatgggtatgactaatggccatagaatgcctatgcaacctggtggtcctatgggtcct
catcaacaaggaccgccgccaccgggttaccaaaaccagtggaatggtcctaatcagcaa
atgggtccgccaagaccaggaatgcctccgcaaggaccggtaggacaaccaagaggacct
cctccaggaatgtttccacctgggcaaggtccaccacgaatgggtccaccacaaggtcca
caaggtcctcaaggacccggcggtccgcgtactgattggaatcgcccacctggaatgcca
ccccatcaaatggctccacctggctctggttttgcaccacatcaacaaggtccaccgatg
cagggtcctccccctggccaaggtcctgtccaaatgatgcaaggaggtcctggccaagct
ccagctcctcacgtgaatcctgcatttttccaacagccaactggtgcaccgcaaggtcct
ccggggcatccgggatatggtccccccaacggcggagctacttcccgcccttacatggct
aacgatatgggaatgtctgaacaagaattggaagaaataatgagtcgtaatcggactgta
tctagttcagctatcgctcgggctgttgctgatgccgcagctggtgaatattcaaatgct
attgaaactttggtcactgcaatatcgttaattaaacagtcaaaagttgcaaacgacgaa
agatgcaaaatattggttagttctctgcacgacacattgcatggcatcgagaccaagagt
tacagttcacgaagagagaggtctagatcacctcgtgacagattgcatcgaaggtcaagg
cgtgaacgaagtcgatctcgtgaacgtgactacagggataggagtcgagaacgtgatcgt
gatcgagaaagggatcgtgacaaatatgttgacaggtatgttgaccgttactatgctaca
gatcgagacggtgatagagatagagaaagggaaagggatcgcgaatacagagagaggagt
cgcgaagacagtttattgtttaacagttctgtaaaagcaagcagccgcagtagaaaaatc
actccgcccgatgtaaccgagtctgttcctgtatcctctaaatccaggtattatgatgat
cgttatcgggaacgtgaacgtgatagggaccgagaacgtgaccgcgatcgtgaacgtgaa
cgagagccagtgtcgagcagacgtgcagtagatcctgacagagatatcgaacgagaacgc
gatcgtagagaagacagagccgaatcttcacaccgtagttctagacattaa
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