Adelges cooleyi (spruce gall adelgid): 126841713
Help
Entry
126841713 CDS
T09500
Name
(RefSeq) transient receptor potential protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
126841713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoo04040
]
126841713
Ion channels [BR:
acoo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126841713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
126841713
NCBI-ProteinID:
XP_050434269
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MTKSQSKEDLIGSKDQLRTDRKSFVLPPDYVLTPTEKKFLLLVERGDCASVQRLINEHKG
QPEVLNIDCTDPLNRTALIAAIENENMDLIQLLLKAGIKVKDALLHAIKEEYVEAVELLL
EWEEKVHVEGQPYSWEAVEQSASTFTPDITPLTLAAHMNNYEILKILLDRGATLPMPHDV
RCGCDECITSSTQDSLRHSHSRINAYKALTSPSLIALSSRDPLLTAFELSWELRRLSTME
SEFRNEYNEMRNTVQTFATSLLDHVRTSYELEIMLNHNPKGDPWEPGERLTLERLKLAIK
YKQKAFVAHPNVQQLLAAIWYDGLPGFRRKSMVGQMIEVGKLGAMFAMYGTMYMLNPESK
MGLLMKKPFIKFVCHSSSYAFFLTLLALASQRVEFLALEWIDTEWTNSILVEMTRKERGS
IPGPIESGIIIYIISLIWREAHSLYSEGLVEYIGDLWNIVDFITNVFYMLWISLRFSSWY
IVQREYNQGYDPWYPRENWDKFDPHLVSEGAFAAAMIFSFLKLVHIFSVNPHLGPLQISL
GRMIIDIIKFFFIYTLVLCAFGCGLNQLLWYYADLESKKCYHISTEEPDFENQDKACTTW
RRFANIFETSQSLFWAGFGLVDLTAFELSGIKSFTRFWGLLLFGSYSVINIIVLLNMLIA
MMSNSYQIISERSDMEWKFARSALWISYFEDGDTVPAPFNLFPSLKNLKRMMGVGASQRT
TGSMIFKSREKALARHDIVMRLLVRRYVTAEQRKSEEFGITEDDVTEIRQDISSMRFEMI
DIFKRNGYKTPIMDGDPSVAQGKKGRVMERRLLKDFQIGLVEGLIQEAITSNEKGPKDVF
SKIAKAIGRRTSQGSKKKDWNAVVRQKSIAKDPIGSTTEGMERRRRQSMRRYILDHQNEG
LQSMDPEKLIEYNPLLAEIAPAARVAYAKFKIPKIKQEYEENTEEVSDEVVENVPSVDVV
DETKKDSIVRPRPKGSRKDPAPGALPFPSTSSEKPGDSLKRCPSKTAKPVDTVPKVEQSP
ARQQPKETARQVRSGGEEGKPGEVEKPQEVADISGEQRSGHESEQSKRDEPENAPKSGDE
PTPSTSEEAAEVKGDDKLKKSEEDPKEGTSKETKPVVKHLKPESPKRSASPKKQGGKSKV
TGEILTGWL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcacagtcaaaagaggacctgatcgggtctaaagaccaactgcgaacagat
agaaaatcatttgtcttaccgccagattatgtactgacacccacagagaagaaattccta
ttgcttgtcgaacgaggcgactgcgcatctgttcagaggttgatcaacgaacacaagggg
cagccggaagtgttgaacattgattgtactgatccgttaaacagaaccgcattgatagcg
gctattgaaaatgaaaatatggacttgatacagttgctgttgaaagctggtattaaggta
aaagacgcgttgttgcacgccatcaaagaggagtacgtcgaggccgttgagttgttgttg
gaatgggaggaaaaagtacacgtcgaaggacaaccctattcttgggaagcggtggagcaa
tcagcttcgacgttcactccggatatcactccgctaacattggctgcacacatgaacaac
tacgagatattaaaaatattattagacagaggtgctaccttaccaatgccccacgacgtc
aggtgtggttgtgacgaatgtattacttccagtacccaagattcgctgcgtcactcgcat
tcgaggattaacgcctataaagcactgacttcgccgtcccttatagctttatcatcgaga
gatccgctgctcaccgcgttcgaattgagttgggagttgcgaagacttagtacaatggaa
tccgaatttagaaacgaatacaatgaaatgagaaacaccgtccaaacgttcgcgacgtcc
ctgttggaccacgtgaggacttcttacgaattggagataatgctaaatcataaccccaaa
ggcgatccgtgggaacctggcgagagattgaccctagagcgtcttaaattggcaataaaa
tacaaacaaaaagcgtttgtagctcatccaaacgttcaacagctgttggccgctatttgg
tacgacggacttccaggatttcgccggaagagtatggtagggcaaatgatcgaagtcggc
aagttaggtgcaatgtttgctatgtacggtaccatgtacatgttgaatccggaatcaaaa
atgggtctactaatgaagaagccgtttataaaattcgtttgtcattcgtcatcgtacgcg
tttttcttaacactattggctctagcgtcgcaaagagttgaatttttagctttagaatgg
atcgacacagaatggacgaattcgattctggtggaaatgacaagaaaagaaagaggctcc
atacccggacccatagaatccggaattataatatacatcataagtttaatatggagagaa
gctcactcattgtactcggaaggcttagtagagtacataggtgacttgtggaacattgtc
gatttcataacaaatgtgttttatatgttgtggattagtttgcggttttcttcttggtac
atagtacagagagaatacaaccaaggatatgatccgtggtatcctcgagaaaattgggac
aaattcgatccgcacctggtctcagaaggagcatttgccgctgctatgatattcagtttc
ttaaaacttgtacacatattcagcgttaatcctcacctgggtccgctgcaaatatctctg
ggtcgtatgattattgacatcataaagttcttcttcatatacactcttgtactttgtgct
ttcgggtgtggtctcaaccaattactctggtactacgcagacttagaatcaaaaaaatgt
taccatattagcactgaagagccagattttgaaaatcaagacaaagcttgtacgacgtgg
cgacgatttgcaaacattttcgaaacgtcgcagtcgttgttttgggctgggtttggcctg
gtagacttgacggctttcgaactgagcggtattaagagcttcactcgtttttggggctta
ttactgtttggatcgtactctgtgataaacatcatagttttgttgaacatgctcatcgct
atgatgtcgaattcgtatcaaatcatttcggaacggtccgacatggaatggaagttcgcg
cgtagtgctttgtggatttcgtactttgaggatggagataccgtaccagcgccttttaac
ttgttcccctcgttgaaaaacctcaaacgtatgatgggagtcggagcgagccagcggact
acggggtctatgattttcaaatctcgagaaaaagccttggcccgtcacgacatagtcatg
cggctattggtcaggcgttacgtgacggcggaacaacgcaagagcgaagagtttggcatc
accgaggacgacgtgacggagatacgacaagacatatcttcgatgaggttcgagatgatc
gacatattcaaacggaacggatacaagacgcccataatggacggcgacccgtctgtcgct
cagggcaaaaaaggacgcgtcatggaacgtcgtctgttaaaggacttccagatcggtctg
gtcgaagggctcatacaggaggcgatcacgtctaacgagaaaggacccaaggacgtgttc
agcaagatcgccaaggccatcggtcggcggaccagtcaggggagcaaaaagaaagattgg
aacgccgttgtcaggcaaaagagtattgccaaagacccgatcggcagtacaacagagggt
atggaacggcgtcgtaggcagagtatgcgtcgctatattcttgaccaccagaatgagggt
ctgcagtcgatggacccggagaaactcatcgagtacaatcctctgctggcggaaatagca
ccggcggcccgagtcgcgtacgccaagttcaagataccgaaaattaaacaggagtacgaa
gagaacacggaagaagtttcggacgaagtggtcgagaacgtgccgtcggtggatgtggtg
gacgagacaaaaaaagattcaatagtcaggcccaggccgaagggctcgcgcaaggatccg
gctcccggggctctgccttttccgtctactagttcggaaaagcccggggactcgttaaaa
cgctgtccttccaaaacagctaagccggtcgatacggtacctaaagtggaacagtctcca
gctcggcagcaaccgaaagagaccgcgaggcaagtaagaagtggcggcgaagaagggaaa
cccggagaagtcgaaaaaccgcaagaggtcgccgatatttctggagaacaacgatcagga
cacgagtctgaacaatcgaaacgggatgagccggaaaatgcacctaaaagcggggatgag
cctacgccgtctacgtccgaagaagcggccgaggtaaaaggcgatgacaagttaaaaaaa
tccgaagaagacccaaaagaagggacctcgaaagagactaagccggtcgtgaaacatttg
aaaccggaatcgcccaaacgttcggctagtccgaaaaagcaaggcggtaagtcaaaagtg
actggagagatattgactggttggctgtga
DBGET
integrated database retrieval system
