Adelges cooleyi (spruce gall adelgid): 126842782
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Entry
126842782 CDS
T09500
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126842782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126842782
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126842782
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
TPR_12
Motif
Other DBs
NCBI-GeneID:
126842782
NCBI-ProteinID:
XP_050435885
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MDSKMDTTPVEEYPPVNWGNEKLEEAQEAVRENQWDVESWAILLREAQTRWINDVRSFFE
KLVETFPTSGRYWKYYIEMEMRGRNFERVEKLFQRCLVKVLNIELWKLYLAYVKETKALL
PTYKEKMAQAYDFALEKIGMDIHSHNIWQDYITFLSSVEAVGSYAENQKITAIRKVYQRG
VVNPMISIEQLWKEYLAFEQSINIMIADKMMIERSRDYMNARRVTKEYEVVIRGLNKNFL
SVPPTGNMDEMKQVELWKKYIIWEKSNPLNTEDTALITRRVMFAFDQALLCMSHHPDFWY
EAAQFLDGSSKILAEKGDISAAKQYSDEASNVYERAIGTVLKTSMLLRFAYADFEEGRMN
YEKVHNIYKSYLENEHADPTLTYVQYMKFARRAEGIKAARAVFKKAREDSRSKYHVYVSA
ALMEYYCSKDKNIAFRIFELGLKKYCDNPQYILSYIDYLSHLNEDNNTRVLFERVLSNTS
LEAEKSVEIWNRFLEFESNIGDLSSILKVEKRRSAVLGKLVEFEGKDTAQLVDRYRFLNL
FPCTSPELKSIGYNEVSNTASKTMHNSQQRSAITDGLDDLENRPNEKQLPEPDVSQMVPY
KPKLNAFPGEHIVKGGTFPPPPAACQLMQVLPPPGCFHGPFVSVDMLMDIFHRLILPEKA
PAPKADNGCDVKLFDTAVSVQWANEDLGAHGGPNKKKRRIGGLSGKGEDSDEDINLAPPA
NDLYRARQQKRVVK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaaaatggacacaactccggtagaagaatatccccctgtgaattggggcaat
gagaaattagaagaagcacaagaagcggtcagagaaaaccaatgggatgtcgaatcttgg
gcgatattgctacgtgaagctcaaaccagatggatcaatgatgtccgatctttttttgaa
aagcttgttgaaacttttccaacgtcaggccgttattggaaatattacatagaaatggag
atgcgaggtcgaaattttgagagagtagaaaagctattccaacgttgtcttgtgaaagtg
ctcaacattgaattgtggaaactttacctcgcttatgtcaaagaaaccaaagctcttttg
cctacttacaaggaaaaaatggcacaagcatatgattttgcattagaaaaaattggcatg
gacattcattcacacaacatatggcaagactacataacatttttgagtagcgtcgaagca
gttgggtcgtatgccgaaaatcaaaagatcacagccatcagaaaggtataccaaagaggt
gttgtgaatcctatgataagcatagagcaactatggaaagagtatttagcgttcgaacag
agcattaacattatgatcgccgataagatgatgatcgaacggagtagggactatatgaat
gccaggagagttaccaaagagtacgaagtagttattagaggattgaataaaaatttctta
agtgttccacccacaggcaacatggatgagatgaagcaggtggaactttggaaaaagtac
ataatctgggaaaaatcaaatcccctgaacactgaagacacggcactcatcacgagaaga
gtgatgtttgctttcgatcaagctctgttgtgtatgagccatcatcccgatttttggtac
gaagcagcacagtttctagatggaagctcaaaaattttagccgaaaaaggagacatatcg
gccgctaaacaatatagtgatgaagcatctaatgtttatgaaagagcaattggaacggtc
ttaaaaacaagtatgttattgcgtttcgcttatgccgatttcgaggaaggtcgaatgaat
tatgaaaaagtacacaatatttacaaaagttatttggaaaacgaacatgccgatccaacc
ttgacttacgtccagtatatgaagtttgcccgtcgagctgaaggtattaaagcggcacga
gcagtatttaaaaaggccagggaagattcgaggtccaaatatcatgtgtacgtctctgcc
gccttgatggaatattactgcagtaaagataaaaacatagcgtttcgcatattcgagctt
ggtttaaaaaagtattgtgacaatcctcaatacattctcagctatatcgactacctttcc
catctcaatgaggataacaatacaagagtattgttcgaaagagttttatcaaatactagt
ttagaagcggaaaaatctgtagaaatttggaatcgttttcttgaatttgaatcgaatatt
ggagatttgtcgagtatattgaaagtagaaaaacgaagatcggccgttcttggcaaactc
gtagagtttgaaggtaaagatactgctcaacttgtggacagatacagatttttgaatttg
tttccatgcacgagtcccgagttgaagtcgattggatataacgaagtttccaatacggca
tcaaaaacgatgcacaactcgcagcaaagatctgccattactgatggattagatgatttg
gaaaaccgaccgaatgagaaacagttaccggaacccgatgtttctcaaatggtaccatac
aaaccaaaactgaatgcatttccgggcgaacacatagtgaaaggaggaacgtttccacca
cctccagctgcttgtcaacttatgcaagtgttgccgcctcctggatgtttccacgggcca
tttgtttccgtagatatgcttatggacattttccatcgactcattcttcctgaaaaagca
ccagcgccaaaagcggataacggttgtgacgttaaattgtttgatactgccgtttcggtg
caatgggcaaacgaggatttgggtgcccatggcggacctaacaaaaagaaacggagaata
ggaggactatcgggtaaaggggaagatagtgacgaggacataaatttagctcctccggcc
aatgatctttaccgtgcccgacagcaaaaacgtgtagtgaaatga
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