Adelges cooleyi (spruce gall adelgid): 126842815
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Entry
126842815 CDS
T09500
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03022
Basal transcription factors
acoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126842815
09124 Replication and repair
03420 Nucleotide excision repair
126842815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoo03021
]
126842815
03036 Chromosome and associated proteins [BR:
acoo03036
]
126842815
03400 DNA repair and recombination proteins [BR:
acoo03400
]
126842815
Enzymes [BR:
acoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126842815
Transcription machinery [BR:
acoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126842815
Chromosome and associated proteins [BR:
acoo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126842815
DNA repair and recombination proteins [BR:
acoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126842815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
UvrD-helicase
PspAA
SNF2-rel_dom
AAA_11
nSTAND3
Motif
Other DBs
NCBI-GeneID:
126842815
NCBI-ProteinID:
XP_050435941
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MKFLIDELEVLFPYEYIYPEQYAYMVELKKGIDAKGHCLIEMPSGTGKTVTILSLIVAYM
LKYPAKLTKLLYSTRTLSEIQKAAEELRVLCDYYKTNKQDANILGIILSARRNLCINPSL
VDEHNGRVVDARCHALTAPFVRARFAEGEDVNVCSFYEKLDSLGRDTLLPPNIYNLDDLK
DLGNKQGVCPYFLSRQTLIHANVVIYSYHYLLDPKIAGIVSKDFNKNTIVVFDEAHNIDN
VCIDSLSSHITSHNLDKAIDGLNKLDSEIAAMKERDAQKLKEEYRKMVDGLREIYKNREA
NAALANPIVPDQVLKITELPGSIRSAEHYIGFMKRFIMYLKVRMNSTTVVQETPIMFIKD
VYQRVCIDRKPLRFCTERLSSLLKTLEISDIVDFSSLITVAQFATLVSTYMKGFMIIIEP
FDEKSSTDCCVMHFSCLDASIAIKPVLDYFNTVVITSGTLSPLDMYPKILNINPVIMTSL
TMTLSRQCFLPMVVGRGNDQVALTSKWESREDSSVARNYGHLLLEMVKVVPDGVVCFFPS
YLYMKSVVAAWYDQGIIEKILDYKLIFIETQNIVVTNHAIKCYAEAVERGKGALLLSVAR
GKVSEGMDFDHHYGRAVIVMGMPYVYTQCRILKARMEYLCTQYQISEGDFLTFDAMRHTA
QCVGRAIRGKMDYGIMVFADKRFARHDKRSKLPKWIQAYLTDSVCNLTVDEAAQMSKRWL
RYIAQPDPVENQMGVSLLDVNGLNKTDFLSKVLQKV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctaatagatgaacttgaagttcttttcccatatgaatacatttatccagaa
cagtatgcgtacatggtggagctcaaaaaaggtattgatgctaaaggacattgtctaata
gaaatgccttcgggaactggtaaaaccgtcacaattctttcactaattgtagcatacatg
ttaaaatatcctgcaaaacttaccaagctgttgtacagcacgagaacgttgtcagaaatc
caaaaagcagctgaagaattgcgcgtattatgtgattactacaaaacaaataagcaagat
gctaacattctcggaataatactttcagctcgtcgaaacctatgtatcaatccttccttg
gtcgatgaacataatggccgtgttgtagatgcacggtgtcatgctctgaccgcaccattt
gttcgtgcacgtttcgctgagggcgaagacgttaacgtgtgtagcttttatgaaaaactt
gattcactcggaagggacacacttttaccacctaatatttacaatttagatgacttaaaa
gacttgggcaacaaacaaggtgtatgcccttattttttatcaaggcagacgctcattcat
gccaatgttgttatttacagttatcattatcttttggatcctaaaattgctggcattgtg
tctaaggattttaataaaaacactattgtagtctttgatgaagctcacaatatagataat
gtctgtatagactctttgagttctcatattacgagccacaacttagacaaagctattgat
ggattaaacaaactcgacagtgaaatcgctgctatgaaagagagagatgcgcaaaagtta
aaagaagagtatagaaaaatggttgatggcctgagagaaatctataaaaatcgtgaagcc
aatgctgcattagcaaatccaattgtgcccgaccaggtattgaaaattacagaacttcca
ggtagcattagaagtgctgaacattatattgggttcatgaagagatttatcatgtactta
aaagttagaatgaactctaccaccgttgtgcaagagactcctattatgtttattaaagat
gtctatcaaagagtttgtatagacagaaaacctctaagattttgtactgagcgtctgtca
tcattactaaaaactttagaaatttctgatattgtcgatttctcatcacttatcacagta
gctcaattcgctaccttagtttcaacctatatgaaaggatttatgattattatagaacct
ttcgatgaaaaatcttcaactgactgttgtgttatgcatttcagttgtttagatgcttca
atagcaattaaaccagtgttagattattttaacacagtggttataacttctgggacattg
tcaccattagatatgtatccaaaaattctcaacatcaacccggtgataatgacatcgtta
accatgactttgtccagacaatgttttttgccgatggtcgttggtagaggaaatgaccaa
gtcgctttgacatccaaatgggaatcgagagaagattcttctgttgcacgtaattatgga
catttattgttagaaatggttaaagtagttccagacggcgtagtgtgtttctttccgtca
tacctttatatgaagtctgtggtggctgcctggtacgatcaaggaatcattgagaaaata
ttagattataaattgatatttattgaaactcaaaatattgtcgtaaccaaccatgctata
aaatgttatgctgaggcagttgaacgaggaaaaggtgcattactactgtctgtggcaaga
ggaaaggtttctgaaggaatggattttgaccatcactatggtcgagcagtgattgtcatg
ggtatgccgtatgtatacactcagtgtcgtatattaaaagctcgtatggaatatttgtgc
acccagtatcaaatatctgaaggagactttctaacatttgatgcaatgcgtcatactgct
caatgcgtgggacgagctattcgtggtaaaatggattatggaataatggtttttgctgat
aaacgatttgctagacacgacaaaagatcaaaattaccaaaatggattcaagcttacctc
actgacagtgtatgtaatttaactgtagatgaagctgctcaaatgtctaaaagatggtta
agatacatagcgcaaccagatcctgttgaaaatcaaatgggtgtttccttattagatgtc
aatgggcttaataaaactgatttcttatccaaagtacttcaaaaagtataa
DBGET
integrated database retrieval system
