KEGG   Adelges cooleyi (spruce gall adelgid): 126843265
Entry
126843265         CDS       T09500                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
acoo  Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03030  DNA replication
acoo03410  Base excision repair
acoo03420  Nucleotide excision repair
acoo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126843265
   03410 Base excision repair
    126843265
   03420 Nucleotide excision repair
    126843265
   03430 Mismatch repair
    126843265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acoo03032]
    126843265
   03036 Chromosome and associated proteins [BR:acoo03036]
    126843265
   03400 DNA repair and recombination proteins [BR:acoo03400]
    126843265
DNA replication proteins [BR:acoo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126843265
  DNA Replication Termination Factors
   ELG1-RFC complex
    126843265
Chromosome and associated proteins [BR:acoo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126843265
DNA repair and recombination proteins [BR:acoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126843265
  Check point factors
   HRAD17(Rad24)-RFC complex
    126843265
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Rep_fac_C AAA_22 AAA_2 AAA_23 ABC_tran
Other DBs
NCBI-GeneID: 126843265
NCBI-ProteinID: XP_050436629
LinkDB
Position
Unknown
AA seq 355 aa
MSLWADKYRPHSLQKVDYHLAQAQYLINLVNQGDFPHLLFYGPNGAGKKTRILALLRQLY
GPGVERLRTEHMNFMTPSNKKFEIMTVASNYHIEVNASDAGMYDRIVVMELIKTVAQTHQ
LDSTKQRHFKVILLTEVDRLTKEAQQALRRTMEKYMATCRIILCANSIAQVIPAIRSRCL
AVRIPAPTQDTICNILKTICKKEGLIMPDGLAVLLSQNCERNLRRAILMLEASKVKQYPF
DENQSVVIPDWQLYIEDTAKQILSQQTPGKLLEVRSMLYELIVHGIPTNVIFKFLLKELV
KNCDMALKREIVDIASFYEHSLLKGNKTMFHLEAFVAKFMLLYSKFMEESLGSVF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtttgtgggcagacaaatacaggcctcactctttacaaaaagtcgactaccactta
gctcaagctcaatacttgattaatcttgtcaaccaaggtgattttcctcatttactgttt
tatggacccaatggtgccggtaaaaagactcgcattctcgctttactacgacagttatac
ggtcctggagttgaacgactacgtactgagcacatgaactttatgacgccatcaaacaag
aaatttgaaattatgaccgttgcgagtaattatcacattgaggtaaatgccagtgatgca
ggtatgtatgatcgtattgttgtaatggaactgatcaaaaccgtagcacaaactcatcaa
ctggactcgactaaacaacgacattttaaagtgattcttttgactgaagtagatcgattg
acaaaagaagcacaacaagctttaagacggacaatggaaaagtatatggctacttgtcgt
ataattttatgtgctaattctattgctcaagtcatacctgctataaggagtagatgtttg
gcggtacgcataccagctccaacacaggacaccatttgtaatattttaaaaactatttgc
aaaaaagaaggcttgattatgccagatggattagccgtactattatcacagaattgtgag
cgaaacttacgacgagctattttaatgttggaagccagtaaagtcaaacagtatccattt
gatgaaaatcaaagtgtagtcataccggattggcaattgtacattgaagacactgcaaaa
caaatattaagccagcagactccgggaaaattattggaagttcgttctatgttgtatgaa
ttaattgtacacggaattccaactaacgtaatttttaagtttctactaaaagaattagtc
aaaaactgtgatatggctttgaaaagagaaatcgtcgatatagcatcgttttatgaacac
agcttattaaaaggcaacaagacaatgttccatctagaagcttttgtcgccaaattcatg
cttctttattccaaattcatggaagagtcactgggtagcgtattctag

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