Adelges cooleyi (spruce gall adelgid): 126844307
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Entry
126844307 CDS
T09500
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126844307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126844307
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126844307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
COG3_C
XhlA
Motif
Other DBs
NCBI-GeneID:
126844307
NCBI-ProteinID:
XP_050438374
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MTGFGFNAPASTSFGFGMNTQTTSSPFGFGGTTTSTAAPSFGFGAPTSAGPTSTPSFGFG
TVTTSATPSFGFGSSTNTTPAFGGFGSSTVPATQSQSIFSGLGQSQPVASIAPSFGGFGA
SFGAKPFGTTTSFALGQPSASTQGISNQLLHQHQQQQPTSNTNDIVINSIVNCKLFGDER
DQIICKLNLLQACWGTGKGYYALNNTPPVEYTPQNPLCRFKAITYSVKPTSSSRDALVTI
IINKKMDDIRKQEVQLTSNLFAIFGSKPNLSVHLDTLKWYTETKSMALIYVEEKLENGHT
KRITNNDLVNYLMQPSPKQQLTTMGVENVFPYAGFTEENLRDYYEHPPAGIDLRVWKQAQ
ADNPNPAVFIPVPIVGFSELCWKYKCHSEQVNVHKLALNSISDRLSELARKKTRVESKLD
QYMDKMDQLTHRIVKVLVGQMVILNAGMALRPEEETIKNQLEVLYNDINSPLRFQGKLTE
IATLVRLKNSELSEDSKNNTGYIPQVAEEIKNFLELQQRMITEMQTVVTEDINSIKLMKE
TLSNVK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgactggttttggtttcaatgcaccagcatcaaccagctttggatttggaatgaatact
caaactacgtccagtccatttggctttggaggtacaacaacatctactgctgctccttca
tttggattcggtgcacctacatcagcaggtcctacttctacaccttcttttgggtttgga
acagtaactactagtgctacaccatcttttggatttggatccagtacaaatacaacacca
gcatttggaggatttggttcatccactgtgccagccactcaatctcagtcaatcttttca
ggtctaggacaatcccaaccagttgcatcgattgccccttctttcggaggattcggggca
tcatttggagcaaaacctttcggtactactacatcatttgcacttggtcaaccatctgca
tctactcaagggattagtaatcaactgttgcatcagcaccagcaacagcaaccaacttca
aacactaatgatatagtaataaattctattgtaaattgtaaattatttggtgatgaaaga
gatcaaattatttgtaagcttaatttgttacaagcttgttggggtacaggaaaaggttat
tatgcactaaataatactccacctgttgagtatactcctcaaaatccactttgtcgtttt
aaagcaattacttacagtgtgaaaccaacatcgtcaagccgagatgctcttgtaactatt
ataataaataaaaaaatggatgacataagaaaacaagaagtgcaacttacatcaaattta
tttgctatttttggaagtaaaccaaatttaagtgtacatttagacactttaaaatggtat
accgagacaaaatctatggcattgatatacgtcgaagagaaactagaaaatggtcataca
aaaaggattacaaataacgatctagtgaactacttaatgcaaccatcacctaagcaacaa
ttaacgactatgggcgtagaaaatgtatttccatatgcagggtttactgaagagaattta
cgggattattatgaacatcctcctgctggtattgatttaagagtatggaaacaagcccaa
gctgacaacccaaatcccgcagtgtttatccctgtaccaattgtgggattttcagaacta
tgttggaagtataaatgtcatagtgaacaagtgaatgtacataaattggcacttaatagt
atctctgatcgactgagcgaactagctaggaagaagacacgagtggaatcaaagcttgat
caatatatggataaaatggaccaattaacacatagaattgtcaaagtattggttggacaa
atggtgatactaaatgctggcatggctctcagaccagaagaagaaaccattaaaaaccaa
ttagaagttttatataatgatattaattcgccattaagattccaaggaaaactgactgag
atagccactcttgttcgattgaagaactcagaactatcagaagattcaaaaaataatact
ggttacataccacaagtagctgaagaaattaaaaattttttggaattacaacagagaatg
ataacagaaatgcaaacggttgtcacagaagatattaattcaataaaactgatgaaagaa
acattaagtaatgtaaaataa
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