Adelges cooleyi (spruce gall adelgid): 126844328
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Entry
126844328 CDS
T09500
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126844328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoo03019
]
126844328
Messenger RNA biogenesis [BR:
acoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126844328
U7-dependent histone pre-mRNA processing factors
126844328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Baculo_FP_2nd
Motif
Other DBs
NCBI-GeneID:
126844328
NCBI-ProteinID:
XP_050438409
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MTSIIKFYTLSGSMDESPPCYLLQIDEFKFLLDCGWDERFSMGVINKLKRYIHQIDAVLL
SHPDQFHLGALPYLVGKCGLNCPVYATIPVYQMGQMFMYDLYQSLYNVEDFELFNLDDVD
AAFDKVVQVKYNQVITLKGKGIGMSIVALPAGNMVGGTIWKISKVGEEDIVYAVDFNHKK
ERHLNGSDLEKLTRPSLLILDCFNAAYSQARRRSRDETLMTTILTTLRNKGNVLIAIDTA
GRVLELMHMLDQLWRNKESGLFVYSLVFLTNVSYNTVEFAKSQIEWMSDKLMKSFEGARN
NPFFFKHVKLCHNINDLNKTSDPKIVLASSPDLESGFSREVFLKWASNPINSIILTHRTA
PGTLARDLIDFGGNRSIKVRIKKRIPLEGRELEDFYAKHNVVNMDIGKVIQESSDSEDEL
VPLQEKSDLLEDADKLKMRKSTKKEVALMFPYYEEKCKVDAYGQIIKHEDYIKFDKSCVN
GTNPDGQNETANDKEEVDLLDLPSKCVDCEQIIHIASKIVHIDFEGRSDGESLKQIILSL
RPRRLLLVRGSALSTKTVSNFTKVFSDSKVFAPKVGQCLNVTTESHIYQVRLTDELLSTV
QLKKGQNGGELAFINARLKLKDDVTDENAMEIDGNQPDKPLRMDDRFYTLEPLPKSEITS
HKTIFINHLKLSDFKQILSKNNISCELSEGVLWCCNRTVCVRRNASGKVLVEGVISRDYY
LIRGLLYNQFIVI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccattattaaattttatacattatcgggttctatggatgaatctccaccttgt
tacctattacaaatagacgaatttaagttccttttagattgtggttgggatgaacgtttc
agtatgggtgtaatcaacaaattaaaaagatacatacatcaaatagatgcggttttgtta
tctcatccagatcaatttcatctaggcgctctcccgtaccttgttggaaaatgtggtctt
aattgtccagtttatgccacaatccctgtttatcaaatgggtcagatgtttatgtatgac
ttgtaccaatctttgtacaacgtggaggactttgaattatttaatttggatgacgtcgat
gcagcttttgataaagttgttcaagttaaatacaaccaagttattacattaaaaggtaaa
ggaattgggatgagtatagtggctttaccagctgggaatatggttggtggaactatatgg
aaaatatcaaaagtaggggaagaagatattgtttatgcagtggattttaaccataaaaaa
gaaaggcatttaaatggcagtgatttagaaaaactcactcgtccatcgttattaattttg
gattgttttaatgccgcttactctcaggccaggcgaagatctagagatgaaacactcatg
actactattctgactacacttcgaaataagggtaacgttttaatagctatagacactgca
ggacgggttttagaattaatgcacatgttagatcagttatggcgcaataaagaatccggt
ctcttcgtttattcattggtattcttaactaatgtaagctataacaccgtagagtttgca
aaatcacaaattgaatggatgagtgacaaattaatgaaaagttttgaaggtgcgaggaat
aatccttttttttttaaacacgttaaactatgtcacaatataaatgatttgaataaaaca
tcagaccctaaaattgtgctggctagtagccctgatctagaaagtggattttcacgagag
gtgtttctcaagtgggcatctaatccgataaatagtataattcttactcatagaacggct
ccaggcacattagctcgtgatttgattgattttgggggcaatagaagtatcaaagtgaga
attaagaaacgaataccattggaaggtagagaactagaagatttttatgcgaaacataat
gttgtcaatatggatattggtaaagttattcaagaaagttctgattctgaagacgaactt
gtaccactgcaagaaaaatctgatttattagaagatgctgataaattaaaaatgagaaag
tcaacgaagaaagaggtagctctgatgtttccttattatgaagaaaaatgcaaagttgat
gcttatggccaaataatcaaacatgaagattacataaagtttgataagagttgtgtaaat
ggtacaaatccagatggacagaatgagactgcaaatgacaaagaagaagttgatctattg
gatcttccctccaagtgtgtggattgtgaacaaattatacacatagcctcaaaaattgta
catatagatttcgaaggccgttcagatggtgaatctttaaaacagattatactttcgcta
agaccaagacgattgttattagtaagaggttctgcgttgagcaccaagactgtttcgaat
ttcactaaagttttttcagatagcaaagtctttgcacctaaagttggtcaatgtttaaat
gtcacaacagagtcacatatttatcaagtacggttgaccgatgaattactttcgactgtt
caattaaaaaaaggtcagaatggaggggagttagcatttattaatgcaagattaaagcta
aaagatgatgtaacagatgaaaatgctatggaaattgatggaaatcaacctgataaacca
ttaagaatggatgatcggttttatacactagaaccattaccaaaatcagaaataacatct
cataagacaatattcatcaatcatctaaaattatcagatttcaaacaaatattatctaag
aacaatatatcctgtgaactatctgagggtgttctatggtgttgtaatcgtactgtgtgt
gttcgtagaaatgcatcaggaaaagttctggtagaaggtgtaattagccgagattactat
ttaattcgtggtcttctttacaatcaatttatagtaatatga
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