Adelges cooleyi (spruce gall adelgid): 126847084
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Entry
126847084 CDS
T09500
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126847084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoo03400
]
126847084
DNA repair and recombination proteins [BR:
acoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126847084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
ACT_PSP_2
AAA_27
Motif
Other DBs
NCBI-GeneID:
126847084
NCBI-ProteinID:
XP_050443073
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MAIKPINHLNLDPEQQKTFVRYYKSLPEKPLTTVRFFNRQDYYTVHGQDATFAAKDFYKT
NHSIKIIGSDNETLESLIFNKANFEAYIKQLLLVNQYRVEIFINRGGKWTLDYKGSPGNL
SQFEDLLFGNVEQIEANTVIALKLSSDFKNNKIIGLGAVDSVERKFQLSEFTDDEYFSHT
ECMVIKVSPKECVLMLDGSNPDMEQLKKVVERCGVLVTTRKKTDFGTDSLVQDLNKLISF
EEGQQPNAHTLPQLELEIASSALAAAIKYLELSSDSDNLNQFTVENLSYDKFVHLDSAGV
EALNLLPAAGTMSKNDSILGIFDKCRTPHGHRLLTQWIRQPLRDLNKINERLNIVETLIN
DTDVRQQLYDQHLRLIPDLQALMRKIQRKRASLQDCYRIYQAVEKLPALVETLNNSDYKT
LQSVITMPLKELVKDMSNYQSMIEETIDFNLVQRGDYLIQSGFDEELQEMRNQMNDLEAK
MKSNLAKTSGQLKIQVKLDSNSQYGFFFKVPLKDAKTVSNNKSYEVLDTTKGGGMRFRSS
KLTEINSDYQSIHQKYLEHQKTIVEEVIKTASSYSATLLNLSRTLAQLDVLTSFAMLAAS
SLRPYVRPILHPQGTGLLDLKQIRHPCVELQDSISYIPNDAYFKQGECTFNVITGPNMGG
KSTYIRSVAVAVFMAHLGSFVPCEAAEISVVDAILARVGANDSQIKGLSTFMVEMIETVS
ILKKATAESLVIIDELGRGTSTYEGCGIACAIAERLASETKAFTLFATHFHELTKLSENI
TTIVNKHVSAVTTDDSLTLLYQVQPGSCDKSFGIHVAAMAKFPTSVIQDASKKLALLESF
ETNQNNDDVQKEISEQTKEKFLNECKRCAQECDLSDEELFSRIKKLRTEYL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaaccaatcaaccatttgaatttagaccccgaacaacagaagacattcgtg
cggtattataaatcattaccagaaaagcctttaacgaccgtgaggtttttcaatcgacaa
gattactacacggtacacggccaagatgctacttttgccgccaaagacttttacaagact
aaccactcaataaaaatcatcgggtcagataacgaaactctcgaatcactgatattcaat
aaagccaacttcgaagcttacattaaacagttattgttggttaatcaatacagagtggag
atatttattaacagaggagggaagtggactctagactacaaggggtcacctggtaactta
tcgcaattcgaagacttgttgtttggcaacgtggaacagatagaagccaatacagtgata
gctttaaaattaagctcagacttcaaaaacaacaagatcatcggattaggagcggtggat
tcggtggaacggaaatttcagctaagtgaattcaccgatgacgagtatttttcccataca
gagtgtatggtgataaaagtatctcctaaagaatgcgttctaatgttggatggctccaat
cccgatatggagcagttgaaaaaagtagtggaacgttgcggagttttggtgacgacaaga
aagaaaaccgattttgggacggattcgttggttcaagatctaaataaattgatttcgttt
gaagagggtcagcaacccaacgctcacacattaccacaactcgagttagaaatcgccagc
tcggctttggccgctgccattaaatatctcgaattgtcgtcagattcggataacctcaat
cagtttactgttgaaaatttgagttacgacaaatttgttcatctggatagtgcaggcgtt
gaagctctcaaccttttacctgcagcgggcaccatgtccaaaaacgattccattcttggc
atttttgacaaatgcaggactccacatggtcatagattattaactcagtggataaggcag
cctttaagggatttaaataaaataaacgaacgtttaaatatagtcgaaaccctaatcaat
gacactgatgttcgtcaacagttatacgatcaacatttaagacttatacccgacctgcaa
gctttaatgcgtaaaattcagagaaaaagagccagcctacaagattgctacagaatatat
caagctgtggaaaaactacccgcacttgtggaaacattgaataactccgattacaaaact
ctccagagtgtcatcactatgcctctaaaagaattggtaaaggacatgagtaactaccag
tctatgattgaagaaacaatagacttcaaccttgttcaacgtggagattatctaatacag
tcgggttttgacgaggaactacaagaaatgagaaatcaaatgaatgatcttgaggcaaaa
atgaaatcaaatttggctaaaacctctggacagttgaaaattcaagtgaagctggattca
aactcacaatatggatttttcttcaaagtgccattaaaagatgccaaaaccgtatcgaac
aacaaatcatacgaggttcttgatactacaaaaggtggtggaatgcgtttcaggtcttcc
aaactaacggaaatcaactccgattatcagagtattcatcaaaaatatttggaacatcaa
aaaactattgtcgaggaagtgattaaaacagctagtagttatagtgcgactctattgaac
ctcagtcggactcttgcacaactcgacgttctcacaagttttgccatgttggcggctagc
tctttacggccttatgtccgaccgattctacatccccagggcacaggtttattggattta
aaacaaatcaggcatccttgtgttgaactacaagattccatttcttacataccaaatgac
gcatactttaaacaaggagaatgtacgttcaatgtgataactggaccaaacatgggcggt
aaaagtacatacatcagaagtgtagccgtagctgtatttatggcacatttaggtagtttt
gttccctgcgaagcggccgaaataagtgtggttgatgctatcttggctcgtgtcggagct
aatgattctcaaatcaaaggactatcgacatttatggttgaaatgatcgaaaccgtttca
atacttaagaaagcgactgcggaatcgttggtgataatcgacgagttgggcagaggtaca
tctacttatgaaggttgcggaatagcatgtgccattgcagagcgtttagcgtccgaaact
aaagcgtttactttgtttgccacacattttcatgagctaactaaactaagcgagaacata
acaacgattgtaaacaaacacgtttctgccgttactactgatgatagtcttacgctttta
taccaagtacaacccgggtcgtgtgataaaagttttggtattcatgttgcggctatggcc
aaatttccaaccagcgtcattcaagatgcttcaaaaaaacttgctctgttagaaagtttt
gaaactaatcaaaataatgatgatgtacaaaaagaaattagtgaacagaccaaggaaaag
tttttaaacgagtgtaaacggtgtgctcaggaatgtgatttgtccgacgaagagttattt
tcgcgtattaaaaaattgagaacggagtacctataa
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