Adelges cooleyi (spruce gall adelgid): 126847249
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Entry
126847249 CDS
T09500
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03030
DNA replication
acoo03410
Base excision repair
acoo03420
Nucleotide excision repair
acoo03430
Mismatch repair
acoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126847249
03410 Base excision repair
126847249
03420 Nucleotide excision repair
126847249
03430 Mismatch repair
126847249
03440 Homologous recombination
126847249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoo03032
]
126847249
03400 DNA repair and recombination proteins [BR:
acoo03400
]
126847249
Enzymes [BR:
acoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126847249
DNA replication proteins [BR:
acoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
126847249
DNA repair and recombination proteins [BR:
acoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
126847249
MMR (mismatch excision repair)
DNA polymerase delta complex
126847249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
126847249
NCBI-ProteinID:
XP_050443380
EnsemblRapid:
LOC126847249
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MFNKKRPNSSDKSGNYNKKFKTDDDDDDFQSSRFEEDLALMEEMDKDFEASPAILGEGPE
QEGSGGLWSRPPMKELSPSTDSLVFQQLTIDYYLGDPVKGMSGAQTGQVPITRMFGITME
GNSVCCNVHGYSPYFYATAPTNFGPQNCKEFKNRLNAVVLNDMRGNQNRVQETVLMVEII
EKKNIYGYHGEENEKYLKITMALPKLVATAKRLLEKEQVFPAFAGHQYRMFESNIDYDMR
FMVDLKIVGCSWIELPVGTYTIRKHNTQLKPHSRCQVEVDVGWQQMICHTPEGEWSKVAP
FRILSFDIECAGRKGIFPEPDKDPVIQIANMVQVENKRLIRNVFTLNTCAPIVGSQVISC
EKENNMLEKWAAFVRECDPDIITGYNINNFDLPYLLNRAKHLNAKNFNFLGRIKNIQSVI
REHVIQSKQMGRRENKSINIDGRVPFDLYLVLVRDYKLRSYTLNSVSYHFLQEQKEDVHH
SIITDLQNGTPQTRRRLAVYCLKDAFLPLKLLDKLMCLINYMEMARVTGVPLGSLLTGGQ
QAKVVSQLLRLAKEKGYIIPTMTSGMQDEQFEGATVIEPIKGYYADPIATLDFTSLYPSI
MMAHNLCYTTLLNQKTINTLNLSENDYKKTPSGSFFLSTSIRKGLLPEILENLLSARKKA
KNDLKSETDPFKQKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISTSVTSYGRTMIER
TKQEVEQKYCIANGYEHDAVVIYGDTDSVMVKFGVKSIEKAMELGREAAEYVTTKFINPI
KLDFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNSPLVANMINTCLQKL
LIDRDPDGAVAYAKEVIGDLLCNRIDISQLVITKELTKSDYAAKQAHVELSLKMKKRDPG
NAPKLGDRIPYVLITGTKGSPAYQRAEDPIFVLENNIPIDFNYYLENQLSKPLVRIFSPI
LGDKAESVLLKGDHTRKKAMVTSKVSALSAFTKKKEVCLGCKSVLPNGEDKNALCKYCLP
KQGELYYKERVKVNELQEKFCRLWTECQRCQGSLHEEVICTSRDCPIFYLRKKVQIDLTA
QVKTMDRFGDPNVI
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagaaaagaccaaattcatccgataaatctggcaattacaataaaaaattc
aaaacagatgatgacgatgacgattttcaaagttccagatttgaagaggatctcgctctt
atggaggagatggacaaagatttcgaagcatcgcctgcaatattgggagaaggcccggaa
caagaaggttccggaggtctgtggtctagaccacccatgaaagagcttagtccaagtact
gacagtttagtttttcaacagctcacaatagattattatctcggagatcctgttaaaggg
atgagtggtgcgcaaactggtcaagttccgataactcgtatgtttggaataactatggaa
ggcaattcagtatgttgtaatgtacacgggtactcgccttacttttacgcaactgctccg
actaattttggaccccaaaattgcaaagaatttaaaaatcgcctaaacgctgttgtgttg
aatgatatgcgtggaaatcaaaacagagtacaagaaactgttctaatggtagaaatcatt
gagaaaaaaaacatatatggttatcatggtgaagaaaacgaaaagtatttaaaaataact
atggcactaccaaaactcgtggccacggctaaacgacttttagaaaaagaacaagttttt
cctgcatttgctggacatcagtatagaatgtttgaatcaaatattgattatgatatgagg
tttatggtcgatttaaaaatagttggatgcagttggattgaacttcctgttggaacttac
acgattcgcaagcataatactcaattaaaaccgcacagtaggtgccaagtcgaagtggat
gtcggttggcaacaaatgatatgtcatacccctgaaggagaatggagtaaagtggcacca
tttcgcattcttagtttcgatattgaatgtgccggtcgtaaaggaatatttcccgaacct
gataaagatccggtaattcaaatagctaacatggtgcaagtagaaaataaacggctgata
agaaatgtgtttacgttgaatacatgtgcacctattgtaggcagccaagttataagttgt
gaaaaagaaaacaacatgcttgaaaaatgggctgcgtttgtacgagaatgtgatccagac
ataattacaggctataacatcaataactttgatttgccttatttgcttaacagagcaaag
catttaaacgcgaaaaatttcaacttcttaggacgtattaagaatatccagtctgtcata
agggaacacgtgatacagagcaaacaaatgggtagaagagaaaacaagagcattaatatt
gacggtagagttccgtttgatttgtacttggtattggtgagagattacaagcttcgatcg
tacacgttaaactctgtcagttatcactttctacaagaacaaaaagaagatgttcatcac
agtattattacagatttgcaaaacggtacacctcaaactagacgtcgattggctgtctat
tgtttaaaagatgcttttcttccgttgaaacttttggataaactaatgtgtttgattaac
tatatggaaatggcaagagtaactggtgttccgttgggaagtttgctcaccggtggccaa
caagcaaaagttgtatcccagttgctccgtcttgcaaaggaaaaaggttacataattcca
acaatgactagtggtatgcaagacgaacaatttgaaggtgctaccgtaattgagccgatc
aaaggttactatgccgatcctatcgcaacactagattttacttccttgtatccgagcatt
atgatggctcataatttgtgttacactacattgttaaaccaaaaaactattaatactttg
aatctgtcggaaaacgattacaaaaaaaccccttcgggtagtttcttcttatccacttca
atacgcaagggacttttgcctgaaattttggaaaatttactttccgcccgtaaaaaggcc
aaaaatgatttgaagtctgagactgatccttttaaacaaaaagtgttggatggtagacag
ctggcattgaaaattagcgctaattctgtgtacggttttactggagcacaagtaggcaaa
ctgccttgtcttgaaatatctacaagtgttacttcatatggtagaacgatgattgaacga
acaaaacaagaagttgaacaaaaatattgtattgctaatggttatgaacacgatgcggtt
gtcatttatggcgatacagattcagtgatggtgaagtttggagttaaatcgattgaaaaa
gccatggaacttggccgcgaagcagctgaatatgtaacaacaaagtttataaatccaata
aaattagattttgaaaaggtttatttcccgtacttgcttatcaataaaaagcgttacgct
ggtctttactttacaaagcctgataagtacgataaaatggattgtaagggattggaaaca
gtacgaagagataactcgccattggtagctaacatgatcaatacttgtttacagaagttg
ctgatcgatagagatcctgatggtgcggttgcttatgctaaagaagtaattggcgattta
ctgtgtaatcgtattgacatctctcagctggtcatcaccaaggaacttaccaagtcggat
tacgctgcaaaacaagctcatgtcgagttgtcattgaaaatgaagaaaagagatccagga
aatgcgcctaaattgggagatcgtataccatacgtattgatcacaggtactaaaggctca
ccggcttaccagcgtgcggaagatcccatttttgtgttggagaacaatataccaattgat
tttaactattacttagaaaaccaattgtctaagccgttggtacggattttttcaccaatt
ttaggggacaaagctgaatcagtattactgaaaggcgaccatacgcgtaaaaaggcaatg
gtaacgtctaaagtaagtgctttgtcagcgttcactaaaaaaaaagaagtatgcttgggc
tgcaagagtgtgctacccaatggggaagacaagaacgcattgtgtaaatactgtttacca
aaacaaggagagctgtactataaggaacgggtgaaagtaaatgaactacaagagaaattt
tgtcgcttatggaccgagtgtcaacgatgccaaggaagtctacacgaagaagtaatctgc
accagtcgagactgtccaatattctatttaagaaaaaaagtacaaatcgatctaacggct
caagttaagacaatggatcgttttggagaccctaacgtcatttga
DBGET
integrated database retrieval system
