Aeribacillus composti: RI196_00025
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Entry
RI196_00025 CDS
T09377
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
acop
Aeribacillus composti
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acop03032
]
RI196_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
acop03400
]
RI196_00025 (gyrB)
Enzymes [BR:
acop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RI196_00025 (gyrB)
DNA replication proteins [BR:
acop03032
]
Prokaryotic type
DNA Topoisomerases
RI196_00025 (gyrB)
DNA repair and recombination proteins [BR:
acop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RI196_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WNF33176
UniProt:
A0ABY9WAM0
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All DBs
Position
3141..5066
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AA seq
641 aa
AA seq
DB search
MEQNHEEQTTYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGF
CTEINVTIEEDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSTELEVFVHRDGNIYYQKYRRGVPCEDLKIVGKTDTTGTIVHFKPDPEI
FKETTEYDYDTLASRLRELAFLNRGIKITLEDKRDEKGRQNLYYYEGGIISYVKHLNRTK
EVLHEEPIYIEGDRDGIKIEIALQYNDGYTSNIYSFANNIHTYEGGTHESGFKTALTRVI
NDYARKTGSIKENDQNLSGEDVREGLTAIISVKHPNPQFEGQTKTKLGNSEVRTITDSIF
SEMFETFLFEHPQTAKKIVEKGLMAARARLAAKKARELTRRKSALEVSNLPGKLADCSSK
DPSISELFVVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAIITA
IGTGIGEDFDVSKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMRGIIEKGYVYIAQPPL
YRIQQGKKVEYAYNDRQLNKILSNLPSQPKPSIQRYKGLGEMNAEQLWETTMNPSTRTLL
QVTLQDAIDADETFEILMGDKVEPRRQFIEENARYVKNLDI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaatcatgaggaacaaacaacatatgatgaaaaccagattcaagtgctggaa
gggttggaagctgttcgaaaaagacctggaatgtatattggatctaccagttccaaaggt
cttcatcatctcgtttgggaaattgtcgataatagtatagatgaggctttagcgggtttt
tgtacagaaataaatgtgacgatcgaagaagacaatagcataacagtaaaagataatgga
cggggaatacccgtcggaatacaagaaaaaatgggaagaccagccgttgaagtcatcatg
actgtacttcatgccggaggaaaattcggaggcggaggctataaagtttctggtggactc
cacggtgtaggagcttcagttgtgaatgcactgtcaacagaactggaggtatttgttcat
cgtgatggaaatatttactatcaaaaatatcgccgaggtgtcccttgtgaagatttgaaa
attgtcggaaaaacggatacgacaggaaccattgtgcatttcaagcctgatcctgaaatt
tttaaagaaacaactgaatatgattatgatacgttggcgtcgcgtttgcgagaacttgcc
tttttaaaccgtggaatcaagattacattagaagataagcgggacgaaaaaggacggcaa
aatttatattactatgaaggcggcattatctcctatgtaaagcatctcaaccgtacaaaa
gaggttcttcatgaagaaccgatttacattgaaggagacagagatggaataaaaatagaa
atcgctcttcaatacaatgatggatatacaagtaatatttactcttttgctaataatatt
cacacttatgagggcggtactcacgaatccggctttaaaactgccttaactcgcgtcatt
aatgattacgctagaaaaactggatctattaaagaaaacgatcaaaatttatcaggtgaa
gatgttcgtgaggggttaaccgcgatcatttctgtcaaacatcctaatcctcaatttgag
ggacaaacgaaaacaaagctcgggaattccgaagtaagaacaattactgattccattttc
tcggaaatgttcgaaacgtttctttttgagcatccgcaaacagccaaaaaaattgtggaa
aaaggtctgatggcggcaagagcccgtttagctgccaaaaaagcaagggaattaacgaga
agaaaaagcgcattagaagtttcaaatttgcctgggaaattagcagattgttcgtcaaaa
gatccatccatctcagaattgtttgtcgttgagggtgattctgccggcggttctgcaaag
cagggacgggacagacatttccaagctattttgcccttgagaggaaaaattttaaatgtt
gagaaagcacgtcttgacaaaatattatctaacaatgaagtgcgtgctataatcactgcc
attggaacagggattggcgaagatttcgatgtttcgaaggcgagataccataaagtagtg
atcatgacggatgccgatgtggatggagcgcatattcgtacattgctgcttacctttttc
tatcggtacatgaggggaattattgaaaaaggatatgtttatattgcgcagcctccttta
tatagaattcaacaaggcaaaaaggttgaatatgcgtacaatgatcgtcaactcaataaa
attttgtccaatcttccaagccaaccgaagccaagcattcaacgctacaaaggacttgga
gaaatgaatgctgagcagctttgggaaacaacaatgaatccgtcaactagaacactgctg
caagtaacgttgcaggatgcgatcgatgcggatgaaacgtttgaaattttaatgggagat
aaagttgagcctcgccgccagtttattgaagaaaatgcacgctatgtaaaaaatttggat
atttaa
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