Aeribacillus composti: RI196_00620
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Entry
RI196_00620 CDS
T09377
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
acop
Aeribacillus composti
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acop03400
]
RI196_00620 (radA)
DNA repair and recombination proteins [BR:
acop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RI196_00620 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
Lon_C
RecA
AAA_16
nSTAND3
Rad51
AAA
KdpD
GvpD_P-loop
AAA_14
SLFN-g3_helicase
AAA_24
NTPase_1
NPHP3_N
divDNAB
KTI12
NACHT
AAA_5
ABC_tran
ATPase_2
MeaB
DUF7125
Isochorismatase
CbiA
MCM
AAA_30
ArsA_ATPase
Zeta_toxin
Fer4_NifH
DAP3
DUF7129
HypA
Motif
Other DBs
NCBI-ProteinID:
WNF33265
LinkDB
All DBs
Position
118433..119809
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AA seq
458 aa
AA seq
DB search
MSKIKSKYICQSCGYESPKWMGKCPGCGAWNSMVEEVIKPKGKHRIAFSHSESSTVSKPS
PIHQIQAAQEPRMLTGLHEFNRVLGGGIVKGSLVLIGGDPGIGKSTLLLQVSSQLAERGN
DVLYISGEESLKQTKLRSDRLGVKGERLFVLSETDLEIIIQSIMETEPAFVIIDSIQTIY
NSEIASAPGSVSQVRECTAELMRLAKTKGIPIFIVGHVTKDGTIAGPRILEHMVDTVLYF
EGDRHHTYRILRAVKNRFGSTNEIGIFEMKETGLKEVLNPSEVFLEERAKGASGSTVVAS
MEGTRPVLVEIQALITPTSFGNPRRMANGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVA
GGVKLDEPSIDLAICISIASSFKDVPTNIYDVFVGEVGLTGEIRRVSRIEQRVQEAAKLG
FKRIFLPKANLGGWKWPEDIEIVGVQNISEALELAIGG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagatcaaatcaaaatatatttgtcaatcgtgcggatatgaatcgccgaaatgg
atgggaaaatgtccagggtgcggcgcatggaattcaatggttgaagaagttatcaagcca
aagggaaaacaccgcattgcttttagtcattccgaatcatccactgtcagcaaaccttct
ccaattcatcaaatccaagctgcgcaagaacctagaatgcttacaggacttcatgagttt
aaccgcgtattgggaggcggaattgtaaaagggtctctcgttttaattggaggggatcct
ggaattggaaaatccactctcttattgcaagtctcctcacagctggcagagagagggaac
gatgttttatacatttcgggagaagaatctttaaaacagacaaaacttcgctccgaccga
ctcggggtaaaaggcgaaagacttttcgtgctttctgaaacggacttagaaatcatcatt
caatccataatggaaactgaaccggcttttgtcatcattgattccattcaaacgatttat
aacagtgaaattgcttctgctcctggaagcgtatctcaggttcgagaatgtacggctgaa
ttaatgagattggcaaagacaaaaggaattccgatttttattgtcggtcatgtaacaaaa
gacggcacaattgcagggccgcgcattttagaacatatggttgatactgtattgtatttt
gaaggtgatcgacaccatacgtaccgaattttacgggcagttaaaaacaggttcggatcc
actaacgaaataggaatttttgaaatgaaggaaacaggtcttaaagaagtgctcaacccg
tcagaagtgtttttagaagagcgtgcaaaaggggcatctggttcaacagtagtcgcttcc
atggaagggacaagacctgttctagtcgaaatacaagctttaatcaccccgacaagcttt
ggaaacccaagaaggatggcaaacgggattgatcataatcgtgtttctttgttgatggcg
gtattggaaaaacgtgttggtttattgctccaaaaccaagatgcctacttaaaagttgcc
ggcggggtgaaattagacgagccttcaattgacttggcaatttgcatcagtatagcttca
agctttaaagatgttccgacgaacatttatgatgtttttgtaggtgaggttggtttaaca
ggagaaattagaagggtttcacgaattgaacagcgtgtacaagaagctgccaaactggga
tttaagcggatttttttaccgaaagccaatctgggcggttggaaatggccggaagatata
gaaattgtcggtgtgcaaaacatttcagaagcgctcgaacttgcaatagggggataa
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