KEGG   Aeribacillus composti: RI196_01950
Entry
RI196_01950       CDS       T09377                                 
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
  KO
K03090  RNA polymerase sigma-B factor
Organism
acop  Aeribacillus composti
Brite
KEGG Orthology (KO) [BR:acop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acop03021]
    RI196_01950 (sigB)
Transcription machinery [BR:acop03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RI196_01950 (sigB)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 GerE HTH_Crp_2 HTH_10 HNF-1_N DUF134 HTH_16 HTH_23 PhyR_sigma-like KORA HTH_3 Ins_allergen_rp HTH_37 HTH_28 MarR_2 MarR HTH_38 NirdL-like_HTH DUF5667
Other DBs
NCBI-ProteinID: WNF33497
LinkDB
Position
376414..377199
AA seq 261 aa
MNKPHGQKRSNNEIHELIRQVQENKDEKAQEQIIELYQPIVVALAKKYSSSKMYQEDLVQ
VGMIGLLGAIDRFDPTVGKSFDAFVVPTIIGEIKRYLRDKTWSVHVPRRMKELGPKINAA
VEQLTSQLERSPKVKEIAEYLGAAEEEVLEAMEMVKNYHTLSVDHSIEAGPDGTAVTILD
LVGQKDEGFERILQKLTIENIMHVLTEREKEIILHSFYHNRSQKEIGEILGISQMHVSRL
LRQALKKLKKAVHADPMEIGQ
NT seq 786 nt   +upstreamnt  +downstreamnt
atgaacaaacctcatggtcaaaaacgaagcaataacgaaatccatgaactcattcgtcaa
gttcaggaaaataaagatgaaaaagcacaagaacaaattattgaactttatcagccaatt
gttgttgcactggcaaaaaagtactcaagttcgaaaatgtatcaggaggatttggtacag
gtcgggatgatcggtttattgggagcgattgatcgcttcgacccaacagttgggaaatca
tttgatgcgtttgttgttccaacgattattggagaaatcaaacgctatcttcgggataaa
acgtggagcgtccatgtgccccgcagaatgaaagaacttggaccaaaaataaatgcagcg
gtggagcagttgacgagtcagctggagcgctctccgaaggtcaaggaaatagcagaatat
ttaggagcagctgaggaagaagttttggaagctatggaaatggtcaaaaactatcatacg
ctttctgttgatcactcaatagaagctggaccggatggaaccgcggtcaccattttagat
cttgtcggacaaaaagacgagggctttgaacgcattcttcaaaaactgactattgaaaac
attatgcacgttttaactgagagagaaaaagaaattattctacattctttttatcataac
cgcagtcaaaaagaaataggtgaaattttaggtatctcccaaatgcatgtttccagacta
ttgcgccaagcattaaaaaaattaaaaaaagctgttcacgctgatccaatggagataggg
caatga

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