Aeribacillus composti: RI196_05100
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Entry
RI196_05100 CDS
T09377
Name
(GenBank) SbcC/MukB-like Walker B domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
acop
Aeribacillus composti
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acop03400
]
RI196_05100
DNA repair and recombination proteins [BR:
acop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RI196_05100
Archaeal homologous recombinant proteins
RI196_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
AAA_21
ABC_tran
GPS2_interact
PRK
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
WNF34045
LinkDB
All DBs
Position
1003037..1006444
Genome browser
AA seq
1135 aa
AA seq
DB search
MKPIKLSLAGLNSYRKMQTVDFETLCDGGVFGIFGPTGSGKSTILDAITLALYGKVERAA
NNTQGIMNHAEDQLYVSFTFELEDGRSKKRYTVERAFKRVDNVRINTRLCRLLEIGEETV
VLADKTNDVNDKIYELLGLTIEDFTRAVVLPQGKFAEFLSLKGSERRKMFERLFNLERFG
DQLNKKLKKRLLESRQQFAELSAEQAGLGDASKEAVLEAKKTFIRCDTVLKEREKQLDEA
AKEFERIQTIWNLQTEKTTYEKKRQELEQEKERFQEIEEKLKKAEQAEMLKPYAEAVLEH
LAEKDRFEKETELWQQEEKKLASLYKEKKEAFEAIRAKKAVEEPELLTKRELLKQLISLD
AEIKEDEASFAKLKEDYEALKTRLHEKQHTERKTSELLNRALEKQQALKQQAKEETVSRE
FREKIQKAYQQKLKIMQLMKDEYELKSKKQKKEDQLNEWREKADESARKKSELNERLAGN
FNQLQKVYDRLCSQMREHEFFKEKVKDDLQAAKSQLEEERTNQAAALISEQLTEGEPCPV
CGSTHHPAPNRHFSIERLKKLEETTQQLERIFKECDQTEQLYSSLKQKLQELSEDLQAEQ
SFLAGVKEIASANEEPIITMDDKPHDLLAYDKFKIEWKALNQDYLEIKDAIRKTIADIRE
VNHITAQIEPLLDAGEKDLSEIMLQLQNVIEQLEEEKRKWDLEFADLDMDQIEMYVKEIS
KKDSLVEQLHERIEKSVSFIQEKEQEIERLREEILNLSTQLAAKKGEMDRQAELIADKQK
RLTAQRAAKENLLTELKRIDLALEQLKRDEQAAYDIFQKTANEYQKAESQLHTAKQQLTS
CISKLEKAEKNWNDRKQQTPFANVHEVRNSVLQEEEKLAMQTSLDQYKKEMEHVASAIER
LEEKLGGTVLKQETWEETKKCLEEARKQVNEAMEQRGAAAKHLQLLKEKHERYVEIEKEK
EELQLLLNRLEKLQAVLKGNSFVEYMAEEQLQQISFDASQRLGELTRQRYAIEVDSEGGF
IMRDNANGGVKRPVSTLSGGETFLTSLALALSLSTQIQLRGKYPLQFFFLDEGFGTLDAE
LLDTVVSALEKLQSQNLSVGVISHVQELRERLPKRLIIEPAEPSGNGTTVRIETI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgataaaactttctttagctggactgaatagctatcgaaagatgcagacggtc
gattttgaaacactatgcgacggcggtgtcttcggaatatttggtccgactggcagtgga
aaatcaacgatattggatgccattacgttagcgctttatggaaaagtagagcgagcggcc
aataatacgcaagggataatgaaccatgcggaagatcaattatatgtcagttttacattt
gagcttgaagatggccgatcaaaaaaaagatacactgttgaacgagcgtttaagcgggtg
gataatgtcaggatcaacacaaggctgtgccggcttctcgaaataggagaagaaacggtc
gttttggcagataaaacaaatgatgtaaatgacaagatttacgagcttttagggctgacg
atagaggattttacccgcgctgttgtccttccgcaagggaagtttgctgaatttctttct
ttaaaaggctcggaaagaaggaaaatgtttgaacgattgttcaatttggaacgattcggc
gaccaattaaataaaaagctgaaaaaacgtcttttggaatcaagacagcaattcgctgaa
ttgtcagcggaacaagcaggtcttggcgatgcctcgaaagaagctgttttagaggcaaaa
aaaacgtttatacgctgtgatacagtgctgaaagaacgggaaaagcagctggatgaggca
gcaaaggaatttgagcggattcagacaatctggaatttgcagacggaaaaaacgacttat
gagaaaaaacgacaggagcttgagcaagaaaaggagcggtttcaagaaatcgaagaaaag
ctgaaaaaagctgagcaagcggagatgctgaaaccatatgcggaagcagtgctcgagcat
ttagcggaaaaggaccgttttgaaaaagaaacagagctttggcagcaggaagagaaaaag
ctagcaagcctttataaagaaaaaaaggaagcttttgaagcgattcgtgccaaaaaagct
gttgaagagccggagcttttaacaaaacgtgaactattgaaacagcttatctcattggat
gcagaaatcaaagaggatgaagcatcgtttgcaaagctgaaagaagactatgaagcattg
aaaacgaggctgcatgaaaaacagcatacagagagaaagacgagcgaattattaaatagg
gcgttagagaagcagcaggctttaaaacagcaggcgaaagaagaaacagtttcaagagaa
ttccgggaaaaaatccaaaaagcatatcaacagaagctgaaaatcatgcagcttatgaaa
gacgaatatgaattaaaaagcaaaaagcaaaagaaagaagaccagcttaacgaatggcgg
gaaaaggctgacgagtccgcccgcaaaaagagtgaattaaacgaacgcctggcaggtaat
ttcaatcaattacaaaaagtttatgatcgtttatgcagccaaatgcgggagcatgaattt
tttaaagaaaaagtaaaggatgatttacaagctgcaaaaagtcagcttgaagaagaaaga
acaaatcaggcggcagctttgatttccgagcagttgacggagggggagccttgccctgtc
tgcggctccacacatcatccggccccgaacagacatttttcgattgaacgtttaaaaaaa
ttagaagaaacaacgcagcagctagaacgaattttcaaagaatgtgatcaaaccgaacag
ctgtattcctcgctgaagcaaaagctgcaggagctgtctgaagatttacaagcggaacag
tcattccttgccggagtgaaagaaatagcgtcggctaacgaagagccgatcattacgatg
gacgataagcctcatgatcttttggcatatgacaaatttaaaatcgaatggaaagctttg
aaccaagattacttagaaataaaagacgcaataagaaaaacaatagcagacattcgtgaa
gtcaaccatattacagcacaaatagaaccgttgctggatgctggggaaaaagacttatcc
gaaatcatgctacaattgcaaaatgtaatagagcagctggaagaagaaaaaagaaagtgg
gatttagagtttgctgatctcgatatggatcaaatcgagatgtatgtaaaggaaattagt
aaaaaagactcgctcgttgaacagctgcacgaacgaattgaaaaaagcgtcagctttatt
caagaaaaagaacaggaaatcgagcggttaagggaagaaatactcaatctttccactcaa
ttagctgccaaaaaaggagaaatggacaggcaggcagaactgatagccgataaacagaaa
aggctcacagcgcaaagagctgcaaaggaaaaccttttaacagagcttaagaggatcgat
cttgcccttgaacagctaaaaagggatgaacaagcagcttatgatattttccaaaaaacg
gcaaatgaatatcaaaaagctgaaagtcagctccataccgccaaacagcaattgacaagc
tgtataagcaagcttgaaaaagcggaaaaaaattggaacgaccgaaaacagcagactcct
tttgcaaatgtgcatgaagtgagaaattccgttttgcaggaagaagaaaaactggctatg
caaacgagtctagatcaatataaaaaagaaatggagcatgtagcatctgcaattgaacgt
ctggaagaaaaattaggcggaactgttcttaagcaggaaacatgggaagaaacgaaaaaa
tgcttagaagaagctagaaagcaagtaaacgaagcaatggaacaaagaggcgcggcggca
aagcatttgcagctgttaaaggaaaaacatgaacgatatgtggaaatagaaaaagagaaa
gaagagttgcagcttcttcttaatcggttagaaaaacttcaagccgtcctgaaagggaat
agttttgtcgaatacatggctgaggaacagcttcaacaaataagctttgatgcttcacag
cggcttggggaattgacaagacaaagatatgcgattgaagtcgattcagaaggcggtttt
atcatgcgtgacaatgcaaatggcggagtaaaacgacctgtttcgacattatctggcgga
gaaacatttttaacttctttagccttagctttgtcgttgtccacccaaattcagcttcgc
ggaaaatatccgcttcagttttttttccttgatgaagggtttggaacgcttgatgcagag
cttctcgatacggttgtatcggctttggaaaaactgcaatcgcaaaatttatccgttggc
gtaatcagtcacgtgcaggagctaagggaacgattgcctaagcggctgatcattgagcca
gctgaaccttccggaaatggaacgaccgtgcgaatcgaaacgatttaa
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