Aeribacillus composti: RI196_09685
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Entry
RI196_09685 CDS
T09377
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
acop
Aeribacillus composti
Pathway
acop02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RI196_09685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
acop02022
]
RI196_09685
Two-component system [BR:
acop02022
]
NarL family
LiaS-LiaR (cell wall stress response)
RI196_09685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
DUF6115
Sigma70_r4
HTH_24
HTH_40
DUF742
U3snoRNP10
HTH_29
IRS
ANK_LRRK2
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WNF31583
LinkDB
All DBs
Position
1997129..1997761
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AA seq
210 aa
AA seq
DB search
MIKVLLVDDHEMVRIGVSAFLSSQPDIEIVGEADNGKKCIELALQLKPDIILMDLVMPEM
DGIEATKEILHQWPEAKIIIVTSFLDDEKVYPALEAGAVSYMLKTSKAEEIADAIRSTYQ
GQSVLEPEVTTKMMARMNKKQNRHPHEELTNREMEVLLLMAQGKSNQEIADELFISLKTV
KVHVSNILSKLGVQDRTQAVIYAFKHSLIK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagtattactagttgatgatcatgaaatggtaagaatcggcgtttcggctttt
ttatcgtcccagcctgacatagaaatcgtcggcgaggctgataatggcaaaaaatgcatt
gaactagctttacaattaaagcctgatattattttaatggacctcgtcatgccggaaatg
gacgggattgaagcgacaaaagaaatacttcatcaatggccagaggcaaaaatcattatt
gtcacaagctttctcgatgatgaaaaagtctaccctgcccttgaagccggtgctgtcagc
tatatgttaaaaacttcaaaagcagaagaaatcgccgatgcaatccgttcaacgtatcag
ggacaatctgtcttagagcctgaagtgacaacgaaaatgatggcaagaatgaataaaaaa
caaaaccgccatcctcatgaagaattaacaaaccgagaaatggaagtgctgcttttaatg
gctcaagggaaatcaaatcaagaaattgcagatgagttgttcatttcattaaaaaccgtc
aaagttcacgtcagcaacattttaagcaagctgggcgttcaagaccgcacccaagccgtc
atttatgcgttcaagcattcgctaatcaagtaa
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