Aeribacillus composti: RI196_10505
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Entry
RI196_10505 CDS
T09377
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acop
Aeribacillus composti
Pathway
acop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RI196_10505 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acop03019
]
RI196_10505 (pnp)
03016 Transfer RNA biogenesis [BR:
acop03016
]
RI196_10505 (pnp)
Enzymes [BR:
acop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RI196_10505 (pnp)
Messenger RNA biogenesis [BR:
acop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RI196_10505 (pnp)
Transfer RNA biogenesis [BR:
acop03016
]
Prokaryotic type
tRNA degradation factors
RI196_10505 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_RRP5
S1_2
Motif
Other DBs
NCBI-ProteinID:
WNF31731
LinkDB
All DBs
Position
complement(2184339..2186450)
Genome browser
AA seq
703 aa
AA seq
DB search
MDQEKHVFSIDWSGRKLTVEIGQLAKQANGAVLVRYGDTVVLCTATASKEAKGVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFPEGFRNEVQVVSMVMSV
DQDCSSEMAAMFGSSLALSISDIPFEGPIAGVTVGRLDDQFIINPTVEQLEKSDIHLIVA
GTKDAINMVEAGANEVPEETILEAIMFGHEEIKRLIAFQEEIVEKIGKEKMEVELYKIDE
ELEKRVREMALADLLQAIQVPEKHAREDAINEVKEKTVAIFEEEEADEETIKQVKEILHK
LVKEEVRRLITEEKVRPDGRKIDEIRPLSSSVGILPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVIPSER
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKSPVAGIAMGLVKSGDNYTVLT
DIQGMEDALGDMDFKVAGTEKGVTALQMDIKIKGLSREILEEALKQARKGRLEILKSMLA
TISEPRKQLSPYAPKILTMVINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIYISS
VDEGMNKKAKKIIEDIVREIEVGQMYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERV
GKVEDVVSVGDEILVKVMEIDKQGRVNLSRKAVLRDQKEQQKS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagagaaacatgttttttccatagattggtccggacgtaagctgactgttgaa
atcggccagctggcgaagcaagcgaacggcgccgttttagtccgctatggagatacggtc
gttttatgtacggcaaccgcttcgaaggaagcaaaaggagtagatttctttcccctaacg
gtcaattatgaagaaaggctttatgctgtcggtaaaatcccgggagggtttattaaacga
gagggtagaccgagtgaaaaagctattttagcgagccgtttaatcgatagaccgattcgc
ccgctgtttccagaagggtttcgcaatgaggttcaagtagtcagcatggtgatgagcgtc
gaccaagattgttcttccgaaatggcggctatgtttggatcttcgctcgcgctgtcaata
tcggacattccgtttgaaggtccgattgccggtgtcacggtcggccgccttgatgaccag
tttatcattaatccaactgtcgaacagcttgagaaaagcgatatccatttaatcgtagcc
ggcacgaaagatgccatcaacatggtggaagcaggagccaatgaagtgcctgaagaaacg
attttagaagcaatcatgtttggccatgaagaaatcaaacgtttgattgcattccaagaa
gagattgtagaaaaaatcggaaaagaaaaaatggaagtggaattatataaaatcgatgaa
gagcttgaaaaaagagttcgtgaaatggctcttgccgacttattgcaagccatccaagtg
cctgaaaaacacgcccgcgaagatgctattaatgaagtgaaagagaagactgtcgcaatt
tttgaggaagaagaagcagatgaagaaacgattaagcaagtaaaagaaattttgcacaag
cttgtgaaagaggaagtgcgccgtctcattacagaagaaaaagtgagacctgacggacga
aaaattgacgaaatccgtccattatcgtcttccgtcggaattttgccgcgcacgcacggt
tcaggtcttttcacccgcggccaaacacaagctttgtctatttgtacgctcggagcttta
ggagacgtacaaatacttgacggactcggcgtggaagaatcaaagcggttcatgcatcac
tacaacttcccgccatttagtgtcggggaaaccggtccgatgaggggtcctggcagacgg
gaaattggtcatggagcgttgggagaaagagcgcttgagccagtcataccttccgagcgc
gattttccgtacacaattcgtctcgtttcagaagtgcttgaatcaaatggttcaacttca
caagcgagcatttgtgcaagcaccttagcgatgatggatgccggcgtgccgattaagtcg
cctgttgctggaattgcaatgggacttgtaaaatctggtgacaactatacggttttaaca
gatattcaaggcatggaagatgcgcttggtgatatggactttaaagtcgcaggtacagaa
aaaggcgtcactgcgctgcaaatggacattaaaattaaaggcttgtcccgtgaaatttta
gaagaagcgttaaaacaagctcgcaaaggccgccttgaaattttgaaatcgatgctggcg
acaatctctgaaccgagaaaacaattatcgccatatgctccaaaaattttaaccatggtc
atcaatccggataaaattcgtgacgtgattggacctagcggaaaacaaattaacaaaatc
attgaagaaacaggagtaaaaatcgatattgaacaagatggcacaatctacatttcttcc
gtagacgaaggaatgaataaaaaagcgaagaaaattattgaagatattgtaagagaaatt
gaagtcggacaaatgtatttaggaaaagttaaacggatcgagaaattcggcgcattcgtg
gaactgtttaacggaaaagatggtcttgtccacatttctgagcttgcagaagagcgggta
ggaaaagtggaggatgttgtgtcagtcggtgatgaaattttagtcaaagtgatggaaatc
gataaacaaggtcgtgtcaatttatcaagaaaggccgttttaagggaccaaaaagagcag
caaaagtcttga
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