KEGG   Aeribacillus composti: RI196_10560
Entry
RI196_10560       CDS       T09377                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
acop  Aeribacillus composti
Pathway
acop03030  DNA replication
acop03430  Mismatch repair
acop03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RI196_10560
   03430 Mismatch repair
    RI196_10560
   03440 Homologous recombination
    RI196_10560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acop03032]
    RI196_10560
   03400 DNA repair and recombination proteins [BR:acop03400]
    RI196_10560
Enzymes [BR:acop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RI196_10560
DNA replication proteins [BR:acop03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RI196_10560
DNA repair and recombination proteins [BR:acop03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RI196_10560
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 DEDDh_C Dak2 DUF1409 RNase_H_2
Other DBs
NCBI-ProteinID: WNF31741
LinkDB
Position
complement(2194226..2198551)
AA seq 1441 aa
MDDKDLQQQKERFQILLKQLEMTDDQIYPYFQNGAILKLTVHKKSKLWDFSFRLENILPF
RILQLFDRRLNKTFSHLANVTFHITTVKQEYDEQLVQDYWEFCLQEMEGVSPPILSLLKE
QMPKLEKQKLMIRTRNETENETIKKKYGPIIQQAYEKYGFPKLTIDTVIDASNEEWEKFL
EQKQKEDEERILQAMMEMKQKGKENQTQESKKLEGPLIIGYKIKDDEEIRTLDNIFDEER
RVVIQGYVFEAETKELKSGRTLCTFKITDYTNSILVKMFGRDKEDNALLASIKKGMWLKV
RGSIQNDTFVRDLVMIANDINEINPKKRLDTAPEGEKRVELHLHSQMSQMDAVTSITDLV
EQAKMWGHEAIALTDHAVVQSFPEAYAASKKFGVKMIYGLEANIVDDGVPIAYNESHRLL
SEDTFVVFDVETTGLSAVYDTIIELAAVKIKNGEIIDRFESFANPHHPLSATTIELTGIT
DDMVQNAPDVDEVLYKFKEWAADSILVAHNASFDMGFINAGYKKYLQVKKADNPVIDTLE
LARYLYPNLKNHRLNTLCKKFDIELVQHHRAIYDAEATGYLLVKLLQEVNERGILYHDEL
NERTGDSKAYERARPFHATLLVQNETGLKNLFKLVSLSHVQYFYRVPRIPRSVLLKHREG
ILIGSGCDKGEIFEAMMQKGPEEVEEMASFYDFLEVHPPEVYYPLIETEQVRNEQAIKEI
IANIVKLGEKLSIPVVATGNVHYLNKEDKIYRKILISSQGGANPLNRHTLPDVHFRTTNE
MLDAFRFLGDEKAKEIVVTNSQYIASLIGDVKPIKDDLYTPKIDGAEEEIREMSYNRAKE
IYGDPLPEIVQARLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSFVAT
MTEITEVNPLPPHYVCPKCKHSEFFNDGSVGSGYDLPDKNCPQCGAPYKKDGHDIPFETF
LGFKGDKVPDIDLNFSGEYQPRAHNYTKVLFGEDKVYRAGTIGTVAEKTAFGFVRGYMND
HNLHFRSAEVDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDTSADWKTT
HFDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSSTESLGVTE
EQIGCKTGTLGIPEFGTRFVRQMLEETRPTTFSELVQISGLSHGTDVWLGNAQELIQSGT
CTLSEVIGCRDDIMVYLIYQGLEPSLAFKIMESVRKGKGLIPEWEEEMKKNGVPDWYIES
CKKIKYMFPKAHATAYVLMAVRIAYFKVHFPLLFYATYFTVRADDFDIETMIKGSTAIRA
KIEEISAKGLDASPKEKSLLTVLEMALEMTERGFSFQKVDLYRSQAKEFIIDGDSLIPPF
NSIPGLGTNAAINIVKAREEGEFLSKEDLQERTKISKTIMEYLENHGCLASLPEQNQLSL
F
NT seq 4326 nt   +upstreamnt  +downstreamnt
atggatgataaagacttgcagcagcaaaaagaacggtttcagattttgctgaaacagctt
gaaatgacggatgatcaaatctacccttatttccaaaacggagcgatcttaaaattaaca
gttcataaaaaatctaaattatgggatttctcttttcggcttgaaaacattcttccattt
cgtatcctgcaattgtttgatagaagattgaacaaaacattttctcatttagccaatgtt
acgtttcacattacaactgtgaaacaagaatatgatgaacagctcgttcaagactactgg
gagttttgcctccaagaaatggagggggtttctccgccgatattatcactgttaaaagaa
caaatgccgaagctggaaaagcaaaaattaatgattcgcacgagaaatgagacggaaaat
gaaacgatcaagaaaaaatacggccccatcatccagcaggcgtacgagaagtacggcttt
ccaaagctgactatcgacacggtgatcgatgcatctaacgaagaatgggaaaaatttttg
gagcagaagcaaaaagaagacgaagagcggattttacaagcaatgatggaaatgaagcaa
aaaggaaaggaaaatcaaactcaggagtctaaaaagctggaaggtcctcttattatcgga
tacaaaataaaagatgacgaagaaattcgcactcttgataacatttttgatgaagagcgg
agagtcgtcattcaaggatatgtttttgaggcggaaacaaaggaattaaaaagcggaaga
acgttatgcacgtttaaaattaccgattataccaattccattttagtcaaaatgttcggc
cgtgataaagaagataatgcattgcttgcatcgatcaaaaaaggaatgtggctgaaagtt
cgcggaagcattcaaaacgatacatttgttcgtgatcttgtcatgattgccaatgacatt
aatgaaatcaacccgaaaaaacggctcgataccgcacctgaaggagagaaaagggtggaa
ttgcaccttcattcgcagatgagccaaatggatgccgtcacatcgatcacagatcttgtt
gaacaagctaaaatgtggggccatgaagcgattgcattgacagatcacgcagttgtccaa
tcttttccagaggcatatgctgcaagcaaaaagtttggcgttaaaatgatttacggtctt
gaagccaatattgttgatgacggtgtaccgattgcttataacgaatcgcacagactttta
agcgaagatacctttgttgtgtttgacgttgaaacaacagggctttcggctgtatacgac
acgatcattgaacttgcagcggtgaaaataaaaaacggggaaattatcgaccgatttgaa
tcgtttgccaaccctcaccatccgctttcagcaacaacgatagaactgacgggaattacc
gatgatatggttcaaaatgctcccgacgtcgatgaagtattgtacaaatttaaagaatgg
gctgccgacagcattttagttgcccacaatgcaagctttgacatgggctttattaatgca
ggctacaaaaaatatttgcaggttaaaaaggcggacaaccctgtcattgatactcttgaa
cttgcaagatatttatatcctaatttaaaaaaccaccgcctgaatacattgtgcaaaaag
tttgatatagagcttgtacagcatcatagagccatttatgatgcggaagcaaccggctat
ttgcttgtaaaattgctgcaagaggtaaatgaacgaggaattctttatcatgatgagctg
aatgagcggactggggattcaaaagcgtatgagcgggcaagaccgtttcacgcgacgctt
cttgtgcaaaatgaaacagggctgaaaaatttatttaagcttgtatctctttcccatgtt
caatatttttatcgcgttccgcgcattccccgttctgtattgttaaagcatagggaaggc
attttaattggttcaggctgcgacaagggagaaattttcgaagcaatgatgcaaaaaggt
ccagaagaagttgaagagatggcttcattttatgattttctcgaagtgcatccgccggaa
gtatattaccctctaattgagacggagcaggttcgaaatgaacaagcgatcaaagaaatc
attgcaaacatagtcaaactaggggaaaagctgtcgattccggttgtggcaacaggcaat
gtccattatttaaacaaggaagataaaatttaccggaaaatcttaatttcttcgcaaggg
ggagcgaatcctttaaaccgccatacattgcctgatgtgcatttccgtacaacaaatgaa
atgctggatgcttttcgttttttaggcgatgaaaaagcgaaagaaattgttgtgacaaac
agccagtacatcgcctctctcataggtgatgtaaaaccgattaaagatgatctgtataca
ccgaaaatagacggtgccgaagaagaaattcgggaaatgagctacaatcgtgccaaagaa
atatacggagacccattgccggaaatcgttcaagcaaggcttgaaaaagagttgaaaagc
attatcggccacggatttgccgtcatttatttgatatctcacaaactagtaaaaaaatct
ttggatgacgggtacttggtcggttcaaggggatcagtcggctcatcctttgttgccacg
atgacggaaattactgaggtgaaccctcttccgcctcattacgtttgtccaaaatgcaag
cattccgaatttttcaatgacggctctgtaggatccggatacgatcttcctgataaaaat
tgtcctcaatgcggagcaccatataaaaaggacgggcatgacataccgtttgaaacgttt
ctaggatttaaaggagacaaggtgcctgatattgatttgaatttttcaggtgaatatcag
ccgagagcacacaattatacgaaagtgctgtttggtgaagataaagtgtaccgtgcagga
acaattggcaccgttgccgaaaagacagctttcggatttgtccgcggctacatgaacgat
cataatctgcatttccgcagtgcagaagtcgatcggcttgtgaaaggatgtacgggggtc
aagcggacgacaggacagcatcccggaggaatcatcgttgttcccgattatatggatata
tatgattttactccaattcaatatccggcagatgatacaagcgctgattggaaaacgaca
cattttgatttccactccattcacgataacttattaaagcttgatatactagggcacgat
gatccgacggtcatcagaatgcttcaagatttaagcggaatcgatccgaagaccattcca
acagatgatccggaagtaatgaaaatcttttcctcaaccgaatcacttggcgtgacagag
gagcagattggctgtaaaacgggcactctagggattccagagttcggcacgcgatttgtc
cgccaaatgttggaggaaacaagaccgacgacattttcagagcttgtccaaatatcagga
ttgtcccatgggacagatgtttggctaggaaacgcacaagaactgattcaaagcggcaca
tgtacattaagtgaggtcattggctgccgcgacgatattatggtttatttaatctatcaa
ggattggagccgtcgttagcctttaaaattatggagtcggttcggaaaggaaaaggcttg
attcccgaatgggaagaagagatgaaaaagaacggcgttccagactggtatattgaatct
tgcaaaaaaatcaaatatatgtttccaaaagctcacgcgacagcttatgtattaatggct
gtgcggattgcatattttaaagtgcattttcctctgctattctatgcaacttattttaca
gtcagagcggacgattttgacatcgaaacgatgatcaaaggaagcaccgcaatcagagcg
aaaattgaagagatcagtgcaaaagggctcgatgcttctccaaaagagaagagcttgctg
accgtattggagatggcacttgaaatgacggagcgtggattttcattccaaaaagtagat
ttataccgctctcaagccaaagaattcattattgacggcgacagtctgataccaccgttt
aattcgataccagggcttggtacgaacgcggccatcaatattgtcaaagcgagagaagaa
ggagaatttttatccaaagaggatctgcaggagcggacaaaaatttcaaaaacgattatg
gaatatcttgaaaatcatggctgtttggcatcgctgcctgagcaaaatcagctctccctt
ttctga

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