Aeribacillus composti: RI196_10615
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Entry
RI196_10615 CDS
T09377
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
acop
Aeribacillus composti
Pathway
acop02020
Two-component system
acop02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RI196_10615
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RI196_10615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acop03021
]
RI196_10615
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
acop02035
]
RI196_10615
Transcription machinery [BR:
acop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RI196_10615
Bacterial motility proteins [BR:
acop02035
]
Flagellar system
Flagellar assembly proteins
Stator
RI196_10615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
Motif
Other DBs
NCBI-ProteinID:
WNF31752
UniProt:
A0ABY9W6G9
LinkDB
All DBs
Position
complement(2208254..2209024)
Genome browser
AA seq
256 aa
AA seq
DB search
MVQSMTLNDERVYWDKWFRHRDQDAGNMLVKKYMPLVRYHVSRISVGLPKNVDKDDLISF
GLMGLYDALEKFDPTRDLKFDTYASFRIRGAILDGLRKEDWLPRSFREKAKKVEAAIERL
EQKYHRNVTPNEVAEELGMTPEEVVHVVNENFFANVLSIDEQLHDQEEGEQMNIVLKDDK
TLTPEEHLLKEELFEHLTKLISQLNDKEQLVLSLFYKEELTLTEIGNVLNLSTSRISQIH
SKALYKLKGTLVKLLS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggtccaatcgatgacactgaatgatgaaagggtgtactgggacaagtggtttcgtcac
cgtgatcaagatgcgggcaacatgctcgtcaaaaaatatatgccgcttgtccgctatcat
gtcagtcgtatttcagtgggtcttccaaaaaatgtcgataaagatgatttaataagtttt
ggattgatgggattatatgatgcactggaaaaatttgaccctacacgggatttaaaattc
gatacgtatgcatccttccgcatacgcggagccattcttgacggactaaggaaagaagat
tggcttccaagaagttttcgggaaaaagcaaaaaaagtggaagcagccattgagcggttg
gagcaaaaatatcatcgcaatgtgacgcctaatgaagttgcagaagagttgggtatgaca
cccgaagaagtcgttcatgtcgtcaatgaaaacttttttgccaatgtcttgtcaattgat
gaacaattgcatgaccaagaagaaggggaacagatgaacattgtccttaaggatgataaa
acattaactccggaagagcatctgttaaaagaggaattatttgagcatttaacaaaattg
atctcacaattaaacgataaggagcagctcgtattaagcttgttttataaagaagagctg
acattaacagagataggaaacgtgctgaatttgtccacttcgagaatttcgcaaattcat
tcgaaagcattatataaattaaaaggaacgctcgttaagcttttatcttaa
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integrated database retrieval system
