Aeribacillus composti: RI196_10795
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Entry
RI196_10795 CDS
T09377
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acop
Aeribacillus composti
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acop03032
]
RI196_10795 (topA)
03400 DNA repair and recombination proteins [BR:
acop03400
]
RI196_10795 (topA)
Enzymes [BR:
acop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RI196_10795 (topA)
DNA replication proteins [BR:
acop03032
]
Prokaryotic type
DNA Topoisomerases
RI196_10795 (topA)
DNA repair and recombination proteins [BR:
acop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RI196_10795 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Zn_ribbon_ACC
HypA
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
WNF31787
LinkDB
All DBs
Position
complement(2240276..2242354)
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AA seq
692 aa
AA seq
DB search
MSDYLVIVESPAKAKTIEKYLGKKYTVKASMGHVRDLPKSQMGVDIEHNFQPKYITIRGK
GPVLKELKNAAKKAKKVFLAADPDREGEAIAWHLAQSLDIDIQSDCRVVFNEITKDAIKD
SFKSPRAINMDLVDAQQARRVLDRLVGYNISPILWKKVKKGLSAGRVQSVAVRLIIDREN
EIKHFKPEEYWTINGDFLKGTESFEAAFWGVEGKKKDLKTEEDVKQVLQKVIGNEFTVTK
VTKKERRRNPAPPFTTSSLQQEAARKLNFRAKKTMMVAQQLYEGIDLGKEGTVGLITYMR
TDSTRISDTAKSEAISYIEKMFGSEYAQAKTRGSQKSGNVQDAHEAIRPTSAFRNPDGIK
DFLTKDQYKLYKLIWERFIASQMSPAVMDTMSVDLENNGVMFRANGSKIKFHGFMKVYVE
GTDDQEEDKSNRLLPDLQEGDKIFSKDLKPEQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLDTIQRRGYVALENKRFVPTELGQIVHELMMEFFPEILDVEFTAKMEHDLDDIEEG
KVNWVKIIDEFYHDFSKNVKKAENEMEKVEIKDEYAGVKCEKCGSEMVYKMGRYGKFLAC
SNFPDCRNTKPILKEIGLKCPKCHEGNIVERKSKRRRVFYGCDRYPECDFISWEKPVERK
CPKCGEILVEKRLKKGVQVQCSSCDYKEEPQR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacttagtcattgtggagtcgccagcaaaggcgaaaacaattgaaaagtat
ttaggaaaaaaatataccgtgaaggcttcaatgggccatgttcgggacttgcctaaaagt
caaatgggagttgacatagagcacaattttcaaccaaaatacatcacgataagagggaaa
gggccggttctgaaagagctcaagaacgctgctaaaaaggcgaaaaaagtttttcttgca
gccgacccggacagagagggagaggcgattgcgtggcatttagcgcaaagcttagatatt
gatatccaatccgattgccgcgttgtgttcaatgaaattacaaaagatgcgatcaaagat
tcttttaaatcgccaagagctattaacatggatttagttgatgcccagcaggcaagaagg
gtattagacaggctggtcggctacaatatcagcccgatcctttggaaaaaggtaaagaag
ggtttaagtgccgggagagttcaatctgttgctgtccgtctaattatcgatcgtgaaaat
gaaattaaacatttcaagcctgaggaatattggacgattaacggagactttcttaaagga
acggagtcgtttgaagctgctttttggggtgttgaaggcaaaaaaaaggatttgaaaaca
gaagaagatgtaaaacaggtgctccaaaaagttattggaaatgagtttactgtaacgaaa
gtaacaaaaaaagaacggagaagaaatcctgcacctccatttacaacttcctctttacag
caggaagctgcaaggaaactcaatttccgtgcgaagaaaacgatgatggtagcacaacag
ctgtatgaaggaatagacctcggcaaggaaggcactgtcggattgattacttatatgcgt
accgattccacgcgaatttcagacacagcgaaatcggaggcaatcagttatattgaaaag
atgtttggcagtgaatatgcgcaagccaaaacgagaggaagtcagaaatcaggcaatgtt
caggatgctcacgaagcgatacggccgaccagcgcttttcgaaatccggatggaataaaa
gactttttaacaaaagaccaatataaattatacaaactgatttgggaacgatttatcgcg
agccaaatgtcgccggctgtcatggatacgatgagcgttgatttggagaacaatggtgtt
atgttccgtgcaaacggttcaaaaatcaaattccatggttttatgaaagtatatgtagaa
gggacggacgatcaagaagaagataaaagcaatcgtcttttgcctgatcttcaggaaggg
gataaaatcttttcaaaagatttaaaaccggagcagcactttacacagccgcctccaagg
tatacggaagcgaggcttgtcaaaacgctggaggaattaggcataggacgtccttctaca
tatgcaccgacgctcgataccattcaaagaagagggtatgttgcgcttgaaaacaaacga
tttgtcccaacagaacttggccaaattgtccacgagctgatgatggaatttttccctgaa
attttggatgtggaatttactgcgaaaatggagcatgatttagatgatattgaagaagga
aaagtaaattgggtaaaaattattgatgaattttatcatgatttttcaaagaatgttaaa
aaagccgaaaatgaaatggaaaaggtagaaataaaagatgaatatgccggtgtaaagtgt
gaaaaatgcggaagcgaaatggtttacaaaatgggaaggtacggaaaatttttggcttgc
tccaattttccagactgccgcaatacaaaaccgattttaaaagaaatcggtttgaagtgt
ccgaaatgccatgagggaaatattgtggagagaaagtcgaagagacgccgcgtattttat
ggatgtgaccgttacccagagtgcgattttatttcttgggaaaagccggttgaaagaaaa
tgtccgaaatgtggagaaattttggtagaaaaacgtttgaaaaaaggtgttcaagtgcaa
tgttcttcttgcgactataaagaagaaccgcagcgttaa
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