Aeribacillus composti: RI196_12235
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Entry
RI196_12235 CDS
T09377
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
acop
Aeribacillus composti
Pathway
acop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RI196_12235 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acop02000
]
RI196_12235 (xylF)
Transporters [BR:
acop02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
RI196_12235 (xylF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
KARI_N
DUF5830
Motif
Other DBs
NCBI-ProteinID:
WNF32048
UniProt:
A0ABY9W8J9
LinkDB
All DBs
Position
complement(2512436..2513524)
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AA seq
362 aa
AA seq
DB search
MKKWWKTLSMAAASLVLASALTGCGVVSSGGEDKSSQAKEDGDKIVVGFSMDTLKEERWQ
RDKDLFEAKVKELGAEVKTLAANGDDAAQLNQAEQLISEGVDVLVVVPHNAEATAAIVDK
AHKEGIKVISYDRLIKNADVDYYVSFDNVRVGEMQAKEIVKQAPTGNYVYIGGADTDNNA
HLFREGAMNVLKPLEEKGDIKIVYDQFSKDWKPEEALKNMENALTANKNNIQAVIAANDG
TAGGAIQALAAQGLAGRIPVSGQDAELAALQRIVEGTQTMTVYKPIHAIATKAAEIAVAV
AKGEKIETDQKIPNGKIDVPSVLLDPIAVTKENVLDTVIKDGFHKLEDVYQNVPKDQWPK
QN
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatggtggaaaactttatcgatggcagctgcatcacttgttttagcttctgct
ttaacaggatgcggcgttgtttcatcgggaggcgaggacaaaagcagtcaagcgaaagaa
gatggcgacaaaattgtggttggtttctcaatggatacgttaaaggaggagcgctggcag
cgcgataaagacctgtttgaagcaaaggtaaaagaattaggagcagaagtaaaaacgctt
gcggctaatggcgatgatgccgctcaattgaatcaagcagaacaattaatttccgaaggg
gtagatgtgttagttgttgtaccacataatgcagaagctacagcagctattgttgacaaa
gcgcataaagaaggaattaaggttatttcgtatgaccgcctgattaaaaatgcagatgta
gactactatgtatcttttgacaatgttcgagttggggaaatgcaggcgaaagagattgtt
aagcaagcaccgactggaaactatgtatacatcggtggtgccgatacagataataatgct
cacctatttcgtgaaggagctatgaatgtgttaaaaccgcttgaagaaaaaggggatatt
aagattgtttatgatcagttctcaaaggactggaagcctgaagaagcattgaaaaatatg
gaaaacgctttaacagcaaataaaaataatattcaagcagttatagcagcaaatgatggc
acagctggcggcgccattcaagcattagcggctcaaggactggcagggagaatccctgtg
tctggtcaagatgcagagctggctgcgctgcaacgcatcgtggaaggaacgcaaacaatg
acggtttataaaccaattcatgctattgccacgaaagcggctgaaatagctgtagctgtt
gcaaaaggagaaaaaatcgaaacagatcaaaaaataccgaacggtaaaatcgatgttcca
tctgtccttctcgatcctattgctgtaacgaaagaaaatgttctagatactgtcattaaa
gatggatttcacaaattagaagatgtctatcaaaatgttccaaaagatcaatggccaaaa
cagaattaa
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