Aeribacillus composti: RI196_16635
Help
Entry
RI196_16635 CDS
T09377
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
acop
Aeribacillus composti
Brite
KEGG Orthology (KO) [BR:
acop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acop03009
]
RI196_16635 (rlmD)
Enzymes [BR:
acop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RI196_16635 (rlmD)
Ribosome biogenesis [BR:
acop03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RI196_16635 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_15
Methyltransf_25
TRM5-TYW2_MTfase
MTS
PrmA
Cons_hypoth95
Methyltransf_11
RrnaAD
UPF0020
TRM
Ubie_methyltran
Methyltransf_32
Methyltransf_12
PCMT
N6_Mtase
N6_N4_Mtase
TPMT
Methyltransf_23
Methyltransf_4
FtsJ
DOT1
Motif
Other DBs
NCBI-ProteinID:
WNF32830
LinkDB
All DBs
Position
complement(3427519..3428895)
Genome browser
AA seq
458 aa
AA seq
DB search
MEAPVKKNDYYDVLFEDLTHDGAGVAKINGFPLFVPNALPGEKGTVKVVKVKKGYGYGRL
MKLSETSPDRADAPCPIYKQCGGCQLQHVSYDGQLRHKQKIVKETLARIGKVDVEKVTVH
PTIGMSDPWNYRNKAQVPIGEREGALIAGFYQQRTHEIIDMERCLIQQTENDRIVREVKA
ILNRYHIRAYNEQTHQGWLRHIVVRYGYQTKQAMLVFVTRTADFPHKKKILAEITAKFPN
IRSIVQNINPKRTNVIFGEETKLLSGLEYIYDYIGSIKFAISARSFYQVNPEQTKVLYEK
VLEYAELTGEETVIDAYCGIGTISLFLAQKAKKVYGVEIVPDAIEDAKRNAKLNGIENVE
FAVGQAEEIMPKWHAQGIRADVIVVDPPRKGCDHSLLQTIIAMKPKKVVYVSCNPATLAR
DIAILEQGGYETKEVQPVDMFPHTAHVECVSRLVLKND
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaccagtgaagaaaaatgattattacgatgtattgtttgaagatttaacacat
gacggggcaggagtagccaaaatcaacggctttcctttatttgtcccgaatgctttgcct
ggagaaaagggaacagtcaaagttgtcaaagtaaaaaaaggctatggatacggacgtctc
atgaaattatcggaaacaagccccgatcgggcagatgcgccttgtcctatatacaaacaa
tgcggaggctgccagcttcagcatgtaagctatgacggccaactgcgccataagcaaaaa
atagtaaaagaaacgcttgcccgcatcggaaaagtggatgtagaaaaagtcacggttcat
ccaacgatcggaatgagcgatccttggaattatcgaaataaagcacaggttccaatcggg
gagcgggaaggcgccctgattgcaggcttttatcagcaaagaacgcacgaaattatcgat
atggagagatgtctcattcagcagacggaaaacgatcgaattgtccgagaagttaaagcg
atattgaaccgctatcacatccgggcttacaacgaacaaacccatcaaggatggctgcgc
catatcgttgtccgctacgggtatcaaacaaagcaagcgatgcttgttttcgttacccga
acagctgattttccacataaaaagaaaattttagctgaaattaccgctaaatttccaaac
attcgatcgattgtccaaaacataaacccgaaacggacaaacgtcatatttggcgaagaa
acaaagctgctttcgggtttggaatatatatatgattatatcggatcaattaagtttgcc
atttccgcacgctctttttaccaagtgaaccctgaacagacgaaggtgctttacgaaaaa
gtgttagaatacgccgaacttaccggagaagaaacggtcatcgacgcctattgcgggatc
ggaacgatttcactcttccttgcgcaaaaagctaaaaaagtgtacggcgtggaaattgtg
cccgatgccattgaagatgccaaacgaaatgcaaaactaaacggcatcgagaacgttgaa
tttgccgtcggtcaagcagaggagatcatgcccaaatggcatgcacaaggaattcgcgca
gacgtcatcgtcgtggatcctcctcgaaaaggctgcgatcattcactgcttcaaacaatt
atagcaatgaaaccaaaaaaagtcgtctacgtctcctgcaacccggcgacattagcgcgc
gacattgccatcctagaacaaggcggctacgaaacaaaagaagtccagccagtcgacatg
tttccgcatacggcgcatgtggagtgcgtttcacggctagtgttaaaaaatgattga
DBGET
integrated database retrieval system
