Amycolatopsis coloradensis: LCL61_04250
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Entry
LCL61_04250 CDS
T10308
Name
(GenBank) hypothetical protein
Organism
acor Amycolatopsis coloradensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
DUF7507
CARDB
DUF7619
Cohesin
DUF4139
Motif
Other DBs
NCBI-ProteinID:
WYW14759
LinkDB
All DBs
Position
complement(945384..951755)
Genome browser
AA seq
2123 aa
AA seq
DB search
MAERRGRNRWRRGIAVLTVVVVALLMGAPLPANAQTQPRGAGTERPIGPEPVYSGLAHGG
ITMAANSVVQCGVGVVCNESASNASAVSWIKTDPAAPGNTASAASLNVPAGAKVLNARLY
WQFNPVASSGTSGDGARGNQVSVKTPGSSTYQRITAETYDWFPATTTGGSPTLYAYGGAA
DVTNLVTAAGTGQYTVADIQACQGQSISRTNLGCWGGWSLVVAYELPSEPLRYLQVWDGM
QVVAGGSTPSSATIALSGIKAPTSRQPNVELGIVAGDGDAPITGDYLQVGPDASSLQTIA
MPAPGGVATNNAFSSRIDRVTATGSGTNVTSREPNSVNNVGYDARSIDITGKVPAGTTAL
QVKIGTVGDALYPQTIWLVTDALEPDLQITKANDPVGNTDDNPPGYVTKGSEVTYTFEVA
NRHADGSVTDLDTATNVVLTDTLPDGVTFVAGSNPDCSASGQLVTCTLPNLRPGQSQKVA
FKVKVGASVPDGTKLDNTGKLTFRGEDTGRPQERTSNTVRNTVASPGYQLTKTVDLAEAI
PGDTLTYQVAVRNTGVIPVPAFTVRDTLPPGTTYVSSTPSKGTASGTGPIEWAVNGLAVG
ETATLTVRVKVEEAAIGKELVNRATVPIGPPPVVPPDNRCPDDPAAACAKTKVPPPSYTV
TKTADKESANPGDVVRYKVTVANTGKVTAADLKVVDDLTGVLDDAVYQNDATASPGSVSY
AEPRLTWTGTLAAGQSAEFAYTVKVKSPNTGDNRLTNVVTSETPGGNCPPGSTDPKCGTT
TPVSGLLIEKSVDKQSANPGDVVKYTVTVRNTGQTKLSGATFTDDLTQVLDDADYQDDGA
ATVGGVTYAAPKLTWTGDLEVGATSVVTYTVKVKSPNTGDNVLRNAVASETPGGNCPPGS
TDPKCGTTTPVSGLVIEKSVDKQSANPGDVVKYTVTVRNTGQTKLSGATFTDDLTQVLDD
ADYQNDGAATIGGVSYAAPKLTWTGDLEVGATSVVTYTVKVKNPNPGDKKLSNVVTSETP
GGNCPPGSTDPKCGTTTPVSGLTIEKSVDKQSANPGDVVKYTVTVRNTGQTKLSGATFTD
DLTQVLDDADYQNDGAATIGGVTYAAPKLTWTGDLEVGATSVVTYTVKVKNPNPGDNVLR
NAVSSETPGGNCPPGSTDPKCGTTTPVSGLLIEKTVDKQSANPGDVVKYTVTVRNTGQTK
LSGATFTDDLTQVLDDADYQNDGAATIGGVTYAAPKLTWTGDLEIGATSVVTYTVKVKNP
VPGDKKLINTVTSETPGGNCPPGSTDPKCGTTTPVSGLLIEKTVDKQSANPGDVAKYTVT
VTNTGQTKLTGATFTDDLTQVLDDADYQNDGAATIGGVSFAAPKLTWTGDLGVGETATVT
YTVKVKNPNTGDNRLKNVVTSETPGGNCPPGSTDPDCGTETPVSGLEIKKTVDKQSANPG
DVVKYTVTVTNTGQTKLTGATFTDDLTQVLDDAVYRNDGAATVGGVSYAAPKLTWIGDLE
IGQTSTVTYTVQVKDPGDGDKKLVNAVTSETPGGNCPPGSTDPDCGTTTPISGLLIKKTA
DKKSVDPGDTVKYTITVTNTGQTKQDAAAFTDDMTEVLDDADYQNDGAATIGGVTYAAPK
LTWTGSLEIGQTSTVTYTVKIKNPNPGDKKLSNVVTSDTPGNNCPPDSTDPNCVADVPSR
ELTVKKTSDKQTANPGDVVTYTVVVTNTGKVDLVGEDAARVTDDLSEVLDDADYADDAAA
APVAGTFTFTAPNLVWAGDLPVGASTTLKYSVKVKNPVTGDHELRNTVSTNTPGTCPPQS
DDPACSTVTPVPGISLEKKADKATANPGDVVKYTVTVRNTGKTKLTGATFTDDLTEVLDD
AVFQKDGAATIGSVTYEEPKLTWTGDLEIGQTATVTYSVKVTKTDGDGKLTNVITTDTPG
GNCPPGSKDPKCGTTTPLSSLKIKKTVDKAEAKPGEVVTYTVAVENTGQATVDDATFTDD
LTQVLDDATFDGTAKASTGAVTYSAPKLTWKGELKPGEKATVTYAVTVRKPATGDHRLRN
VVTSDTPGGNCPPGSANPDCGTDTRVPPTPQPPDKPNPQPPTTPRPPGLAVTGSPVKTMT
VLALGMLAIGALLLLAGRRRRES
NT seq
6372 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgtcgtgggcggaatcggtggcgccggggcatagcggtgctcacggtggtc
gtcgtggctctgctgatgggcgccccgctgcccgcgaacgcccagacccagccacgcgga
gcgggcaccgaacggccgatcgggccggagccggtgtactccgggctggcgcacggcggt
atcacgatggccgccaactccgtcgtgcagtgcggcgtcggcgtggtctgcaacgagtcc
gcgagcaacgcgagcgcggtgtcgtggatcaagaccgacccggccgcacccggcaacacc
gcctccgcggcgagcctgaacgtcccggccggcgcgaaggtgctcaacgcccggctgtac
tggcagttcaatccggttgccagcagcgggacctctggcgacggggcccggggcaaccag
gtctccgtgaagaccccgggctccagcacctaccagcggatcaccgccgaaacctacgac
tggttccccgcgaccacgacgggcggctccccgaccctgtacgcctacggcggcgccgcc
gacgtcacgaacctcgtgacggccgccgggaccgggcagtacacggtcgccgacatccag
gcctgccagggccagtcgatcagccggacgaatctcggctgctggggtggctggtcgctg
gtggtggcctacgaactgcccagcgagccgttgcggtatctgcaggtctgggacggtatg
caggtggtcgcgggcgggagcaccccgagctcggccaccatcgcgctgagcggtatcaag
gcgccgacctcgcgtcagcccaatgtcgaactcggcatcgtcgcgggtgacggtgacgcg
cccatcaccggcgactacctccaggtcggcccggacgcgtccagcctgcagaccatcgcg
atgcccgcgccgggcggcgtggcgaccaacaacgccttcagtagccgcatcgaccgtgtc
acggccaccggttcgggcacgaacgtcacttcacgcgagcccaactcggtgaacaacgtc
ggctacgacgcccgcagcatcgacatcaccggcaaggtccccgcggggaccaccgcgctc
caggtgaagatcggcaccgtcggcgacgcgctgtacccgcagacgatctggctcgtcacc
gacgcactcgaacccgacctccagatcaccaaggccaacgacccagtgggcaacaccgac
gacaatccgccgggttacgtcaccaagggcagcgaggtcacgtacaccttcgaggtcgcc
aaccggcacgccgacggcagtgtcaccgatctcgacaccgcgacgaacgtggtgctcacc
gacaccctccccgacggcgtcacgttcgtggccgggtcgaatccggactgttcggcgtcc
gggcagctggtcacctgcaccctgccgaacctgaggccggggcagtcgcagaaggtcgcc
ttcaaggtcaaggtcggtgcctcggtgccggacggcaccaaactcgacaacaccggcaag
ctgaccttccgcggcgaagacaccggacggccgcaggaacgcacgtcgaacacggtgcgg
aacacggtcgcctcaccgggataccagctgacgaagacggtcgacctcgccgaagcgatc
ccgggcgacaccctgacctatcaggtggccgtgcggaacaccggggtgatccccgtgccc
gcgttcacggtgcgcgacaccttgccgccggggacgacctacgtgtcctccacgccgtcg
aagggcaccgcgtccggtaccgggccgatcgagtgggccgtgaacggcctcgccgtcgga
gagacggccacgttgaccgtgcgtgtgaaggtcgaagaggccgccatcggcaaggagctg
gtgaaccgcgcgaccgttccgatcgggccgccgccggtcgtcccgccggacaaccgctgc
ccggacgatcccgccgccgcgtgcgcgaagaccaaggtgccgccgccgtcgtacacggtg
acgaagaccgcggacaaggaatccgcgaaccccggcgacgtcgtgcgctacaaggtcacc
gtcgccaacaccggaaaggtgaccgcggcggatctcaaggtcgtggatgatctgaccggg
gtgctggacgacgcggtctaccagaacgacgccaccgcatcgccaggttcggtgtcctat
gcggagccgaggctgacctggaccggcaccctcgcggcggggcagagcgccgagttcgcc
tacacggtgaaggtcaagagcccgaacaccggcgacaatcggctgacgaacgtggtgacg
tcggagactccaggtggaaattgcccgccgggttcgaccgacccgaagtgcggtaccacg
acgccggtttccgggctgttgatcgagaagtcggtcgacaagcagtcggcgaatccgggc
gatgtcgtgaagtacacggtcacggtgcggaatacgggccagacgaagctgagcggtgcg
acgttcacggacgatctcacgcaggtgctggacgacgcggactatcaggatgatggtgcg
gcgacggtcggtggtgtcacctatgcggcgccgaagttgacgtggaccggtgacttggaa
gtcggtgccacgtcggtggtgacgtacacggtgaaggtcaagagcccgaacacgggcgac
aatgtgctcaggaacgcggtggcgtcggagacgccgggtggtaactgtccgccgggttcg
accgacccgaagtgcggtaccacgacgccggtttccgggctggtgatcgagaagtcggtg
gacaagcagtcggcgaatccgggcgatgtcgtgaagtacacggtgaccgtgcggaacacc
ggtcagacgaagctgagcggtgcgacgttcactgatgatctgacgcaggtgctggacgac
gcggattaccagaatgatggtgcggcgacgattggtggtgtgtcgtatgcggcgccgaag
ttgacgtggaccggtgacttggaagtcggtgccacgtctgtggtgacgtatacggtgaag
gtcaagaacccgaaccccggcgacaagaagctgtccaatgtggtcacgtcggagactcct
ggtggaaattgcccgccgggttcgacggatccgaagtgcgggacaaccacgccggtgtcc
ggactgacgatcgagaagtcggtcgacaagcagtcggcgaaccctggcgatgtcgtgaag
tacacggtcacggtgcggaatacgggccagacgaagctgagcggtgcgacgttcaccgat
gatctcacgcaggttctcgacgacgccgattatcagaacgacggtgcggcgaccatcggt
ggtgtcacctatgcggcgccgaaactgacgtggaccggtgacctggaagtcggtgccacg
tcggtggtgacgtatacggtgaaggtcaagaatcccaatcccggcgacaatgtgctcagg
aacgcggtgtcgtcggaaactccaggcgggaactgtccgccgggttcgaccgacccgaag
tgcggtactacgacgccggtttccgggctgttgatcgagaagaccgtggacaagcagtcg
gcgaaccctggcgatgtcgtgaagtacacggtcacggtgcggaatacgggccagacgaag
ctgagcggtgcgacgttcaccgatgatctcacgcaggttctcgacgacgccgattatcag
aacgacggtgcggcgaccatcggtggtgtcacctatgcggcgccgaaactgacgtggacc
ggtgacctcgaaatcggcgccacgtcggtggtgacgtacacggtgaaggtcaagaatccc
gtcccgggcgacaagaaactcatcaacacggtcacgtcggagacgccgggcgggaactgt
ccgccgggttcgacggatccgaagtgtggcacgaccacgccggtttccgggctgttgatc
gagaagaccgtggacaagcagtcggcgaatcccggtgacgtcgcgaaatacacggtgacg
gtcaccaacaccggtcagacgaagctgaccggtgcgacgttcaccgatgatctgacgcag
gttctcgacgacgcagactatcagaatgacggtgccgcgacgatcggtggagtgtcgttc
gcggcaccgaagctgacctggacgggtgacctcggcgtcggcgagacggccacggtcacg
tacacggtcaaggtcaagaacccgaacaccggcgacaaccggctcaagaacgtggtgacg
tcggagacgccgggcgggaactgcccgccgggctccacggatccggactgcggcacggaa
accccggtttcgggtctggagatcaagaagaccgtcgacaagcagtcggcgaatcccggt
gacgtcgtgaagtacacggtcacggtcaccaacaccggtcagacgaagctgaccggcgcc
actttcaccgacgacctgacccaggtgctcgacgacgccgtttaccggaacgatggagcg
gcgacggtcggtggtgtgtcgtatgcggcgccgaagttgacgtggatcggcgacctggag
atcgggcagacctcgaccgtcacctacacggtccaggtgaaggatccgggcgacggcgac
aagaagctcgtcaacgccgtcacgtccgagaccccgggcgggaactgcccgccgggctcg
accgatccggattgcggcacgaccaccccgatctccggactgctcatcaagaagaccgcc
gacaagaagtcggtcgaccccggcgacacggtgaagtacacgatcaccgtcaccaacacc
gggcagaccaagcaggacgcggccgccttcaccgacgacatgaccgaagtcctggacgac
gccgactaccagaacgacggtgcggcgaccatcggcggcgtcacgtacgcggcgccgaag
ctgacgtggaccggctcgctggagatcgggcagacctcgaccgtcacctacacggtcaag
atcaagaacccgaaccccggcgacaagaaactgtccaatgtggtcacttcggacaccccg
ggtaacaactgcccgccggattcgaccgacccgaactgcgtcgcggacgtgccgtcccgc
gaactgacggtcaagaagacgtcggacaagcagaccgcgaacccgggtgacgtcgtcacg
tacaccgtcgtcgtcaccaataccggcaaggtagacctggtcggcgaggacgccgcacgg
gtcacggacgacctgtccgaggtgctcgacgacgccgactacgccgacgacgccgcggcg
gccccggtcgccgggacgttcaccttcaccgcgccgaacctggtgtgggcaggcgatctc
ccggtgggtgcttcgaccacgctgaagtattcggtgaaggtgaagaaccccgtgaccggc
gaccacgaactgcggaacaccgtcagcaccaacaccccgggcacctgcccaccgcagtcc
gacgacccggcgtgctcgaccgtcactccggtgcccggcatctcgctggagaagaaggcg
gacaaggccacggcgaacccgggcgacgtcgtgaagtacacggtgaccgtgcgcaacacc
ggcaagacgaagttgaccggtgcgacgttcaccgacgacctcaccgaggtcctcgacgac
gcggtgttccagaaggacggtgcggcgacgatcggttcggtgacctacgaggagccgaag
ctgacctggaccggcgacctggagatcgggcagacggcgacggtcacgtacagcgtcaag
gtgaccaagaccgacggcgacggcaagctgaccaacgtcatcaccaccgacactccgggt
ggcaactgcccgccgggcagcaaggatccgaagtgcggcacgacgacaccgctgtccagc
ctgaagatcaagaagaccgtcgacaaggcggaggcgaaaccgggcgaggtcgtgacctac
accgtcgcggtggagaacaccgggcaggccacagtggacgacgcgacgttcaccgacgat
ctgacccaggtgctggacgatgccacgttcgacggcacggcgaaggccagtacgggagcg
gtcacctattccgcgccgaagctcacgtggaagggcgagctcaagccgggggagaaggcc
accgtcacttacgccgtcaccgtgcggaagccggcgaccggtgaccaccgcctccgcaac
gtcgtcacgtcggacacaccgggcggcaactgcccgccgggttcggcgaaccccgactgc
ggcaccgacaccagggtgccgccgacgccgcagccgccggacaagccgaaccctcagccg
ccgacgaccccgcgtccgcccggtctggccgtgaccggctcgccggtgaagacgatgacg
gtgctggcgctgggcatgctggccatcggcgcgctgctgctcctcgccggacggaggcgc
cgggagtcctag
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