Amycolatopsis coloradensis: LCL61_05000
Help
Entry
LCL61_05000 CDS
T10308
Name
(GenBank) toxin glutamine deamidase domain-containing protein
Organism
acor Amycolatopsis coloradensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gln_amidase
RelA_SpoT
ADPrib_exo_Tox
ART
WXG100
Motif
Other DBs
NCBI-ProteinID:
WYW14905
LinkDB
All DBs
Position
complement(1127217..1134332)
Genome browser
AA seq
2371 aa
AA seq
DB search
MEMPDAVKWLLPIVVGESWPEGDEDKLRELRDAWHNASKAIQPIADTATKGATEVLGGWS
GQGAEKFAEAWKKFVEGDEAYFKSLADSSKALGDSCNATALDVEYTKYMIIISLVILAAQ
IVAMIAAAAVTFGGSTAGIAPAQIATRMTVQMIFRQLMQKLAQEGFKKVAKELLEKLLKE
GLKKIGKEVLQNTAMNLAMDAGIQGLQMAKGDRDSWDFSKTKDSAISGAVDGVVGAGSSS
IGKGATKGLSDSVGGQIVDSAARGAVRGAAEGVASTVGQAAVTGDLDKLSAKDVLMGASG
GAVGGGVDGAKSQIGDIKAANTPGASAGDGPSTPDVDSGDSGTPSRTPGSSDSGTSSESR
SSSNSGSSSDSGTSSDSRSSSDSGSSDSSTSSDSRSSSDSGTSSRSDSSSDPAPRSTSDS
QAASSRGSDGSADPQPRSESGPQRTADNDRISQSSTQAPERPADAPANTGDGQRPAQTHQ
NAPAAAADNGSGQQQQAAAGNQQQAPAAQSQAPAQTPAASPAPSPSQGPAASPAPSPSHN
PSQSSAMPPAASSSTGAPSSSGGYGMASNPGSTSPAPSGGYGMAPGGNGPTPGGGFPPPG
HDPSRPVRPNDSVQAAGFAGNGGPQQPRFDQPPAPMPFQGQQPMQPPPPGGFAPPPPPPP
GGGGAMPPRGPQGQPGPMGPRPPQQHPGQGGYPQDRGPRQRPQQPPQPPGPQGPPRPPQG
YQGRPGPGPGPNGGVPPRPQTPPPGPPPGNRGPAGYQPPPPRPQQPGNGPFPGNRGPVPP
PPGHQSGHHPGRPGHPGQQPGRPMPPGAEPPRFGGPQRPPQVPAPRPGHDGNAGPQQPQR
PQQQPPVRPVEHAPQQAPQDRGGNVLPKDTELPKDTEAPKDTNVPKDTELPKDVESPKDT
EAPQDVTPDDRTTVDEPYLTDPDFHTDDPAAYRALAETQIDKRGFDKDTGEARSEQVRRE
GLAKRDAHEDPRVKEMSDQGAYAVHSYTRTDMAERITHAQRHGGAELEALRPHIEAITSG
LNEMPAYEGLVSRRVNFNGNESAIRAFLEAHAKGQVIVDPQMLSTSRVTPEHPHSNFPGE
VEMRIQSKTGRHIEDLASKKEEREVLMKSATQLRVTDVKMGPGHPEHPDYKKRLDDGSPN
ELPKWIVECEEVVAGDDGHLSPDEVHQKVAERRDYNNAVQERLAQEAADQEAQLRREHPE
LFQGQGLAGLETKLADGKGGWIDATDAPVRDAPEPPKEHAPDGGWSELAKPLEEGGTPVI
HAGSTETPHQQVRLVMDEIPAIGEANTRNYYAPESWKDGYQTNSAEALVAFEDRMNGGDS
VAAPSTGGSPLQHVSDRLGGQWSDRNGFADIARELGERPVGARTAVAFEHHAAADPNAPE
GSPRSKDRIETRIVAAVNTPHGVVFADPMTGRLATLPDDPTSIKAMPMGGGDAPHTPETP
HTDRSADSETPVQEQAPKTELDIAERLKGPEETPTRVDESYLSDDGFRGTPEDHKSLRDR
YDSAELAEQAREKALKRLEASPLKDRVSPEAAEAIYSYSREHAYAINDANRRGEAHPDFE
NAQRSTRAIVGALNELPDFHGEAIRGIDTKGDMRAAAIMAAHYEPGQTVPEPTMTSSTIK
TSSDTKSKFGEDVEIHIVSKTGKDVSSLAENPRENEAINKPATQLYVHSKEFKTPPLVDR
PKWVIHAEEVTPGDPRYLDPETAKQKMDERRARHAAEAPELARLAQAQSMARLGGFDEPQ
TPHFSTENPADHGVADVEKGPEYGDQPAQDHSATDDTLELPAPERDYSSMAVATNPPSEP
AIHAGSASPAQQAAYLADRHPRLGEVNPHFNDPDALANGYRSNCTRTPGAYMDRLNGIDS
TAEPLLVHEMDSRGTLEHVEERFGGEFSDRADYDTVIREMRDMPTDHHAVVAVKYLDENG
VERGHVAMVANTRDGVAFIDPQSGALMNLPQPPLGVKLMHVGVPEGPAAQPVDPRIAFAR
DDTPDVPPSRIGPDGRPIVTPPLDAGYGMAHDEQPPGDRAEAERFLNDPEVAAAVDGLDP
DKKRAVHEDENGVKHDVGPMRDLIREHLPAHPELVRLMEHPDNAYLRASLLNNPMTIGSL
LLHPEAIPILEDALRDVEERGYQMIDDVREDGPGDTPLTQEQRDLANAAADIAADVEPGD
QYHAGFDRADKGDPGKIQEFLDAEREAWPRNQGDLNRIAERIAEENNGDASGRPGPKDDD
RAKAKIAGYDGDASKLTDLVGVKIQFDTLADVYNALSAVMDDPDLRIVSFDDRFANPQDS
GYRDLQMNVRLPNGHVAELRLHLKHIDTVSAYEHALYEVRRDFPTYNRTLDENNKKRLSP
EQALLEAALMDRVREKFMAGLRKGLPPEENT
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcccgacgcggtcaagtggctcttgccgatcgtcgtcggggaaagctggccc
gaaggcgacgaggacaagctccgcgaactacgcgacgcctggcacaacgcttcgaaggcg
attcagccgatcgccgacaccgcgaccaagggcgccaccgaggtcctgggcggctggagc
ggacagggtgcggagaagttcgccgaggcctggaagaagttcgtcgagggcgacgaggcg
tacttcaagtcgctggccgattcctcgaaggcactcggcgactcgtgcaacgcgaccgcg
ctggacgtcgagtacacgaagtacatgatcatcatctcgctggtgatcctggccgcgcag
atcgtcgcgatgatcgcggccgcggcggtgacgttcggcgggtcgacggccgggatcgcg
ccggcccagatcgccacccgcatgaccgtccagatgatcttccggcagctgatgcagaag
ctcgcgcaggaaggcttcaagaaggtcgcgaaggaactcctggagaagcttctcaaggag
ggcctgaagaagatcggcaaggaggtcctgcagaacacggcgatgaacctcgccatggac
gcgggcatccagggcctccagatggccaagggcgaccgcgacagctgggacttcagcaag
accaaggattccgcgatcagcggcgccgtcgacggcgtggtcggcgcgggcagcagcagt
atcggcaagggcgccaccaaggggctttccgacagcgtcggcggccagatcgtcgacagc
gcggcgcgcggtgccgtgcgcggcgcggccgaaggggtcgccagcacggtcgggcaggcc
gccgtcaccggtgacctggacaagctttcggccaaggacgtcctgatgggcgcttccggt
ggagcggtcggcggtggtgtcgacggggcgaagagccagatcggcgacatcaaggccgcg
aacacgccaggcgcctcggcgggcgacggtccttccacgcccgatgtggattccggggat
tcggggacgccttcgcgtactccggggtcttcggactcgggcacttcgtcggagtcacgc
tcttcgtcgaactcgggctcctcctcggactcaggcacttcgtcggactcgcgttcttcg
tcggactcgggctcttcggactcgagcacttcatcggactcgcgttcttcttcggattcc
ggaacctcttcgcggtcggactcttcctcggacccggcaccacggtccacttcggacagt
caggcggcttcgagccgcggttcggacggctccgctgatccgcagccgcgctccgagagc
ggtccgcagcggacggcggacaacgaccggatcagccagtcctcgacgcaggccccggaa
cgtccggccgacgccccggcgaacaccggtgacggtcagcgtccggcgcagacccaccag
aacgccccggcggccgccgccgacaacggatccggtcagcagcagcaggccgcggcgggt
aatcagcagcaggcacccgccgcccagtcgcaggcgccggcacagacacccgcggccagc
cctgcgccgagcccgtcacagggacccgcggccagtccggcgccgagcccgtctcacaat
ccttcgcagtccagcgcgatgccgcccgctgcttcctcttcgacgggtgcgccgtcgagt
tcgggcgggtacggcatggcgtcgaacccgggttcgacctcgcccgctccgtcgggtggc
tacggcatggcgcccggcggcaacgggcccacccccggcggtggtttcccgcctcccggg
cacgatccgtcccggcccgtccggccgaacgacagcgtccaggcagcgggtttcgcgggc
aacggcggaccgcagcagccgcgtttcgaccagccgcccgccccgatgcccttccagggc
cagcagccgatgcagccgccgcctccgggtggtttcgcgccgcctccgccaccgcctccc
ggtggtggtggcgccatgccgccgcgaggaccgcaggggcagcccggtccgatgggcccg
cgtccgccgcagcaacatcccggtcagggtggatatccgcaggaccgcgggccgcgtcag
cgtcctcagcaaccgccgcagccccctggtccgcagggtccgcctcggccgccccagggg
tatcagggcaggcccggacctggtccgggcccgaacggcggggtcccgccgcgtccgcag
acacctccgcccggtccgcctccgggcaaccgcggcccggcgggctatcagccgcctccg
ccgcggccccagcagccgggcaacggtccgttccccggcaaccgcggtcccgtgccgccg
ccacccggtcaccagtccggtcaccaccccggccggccggggcatccgggacagcagccc
ggcaggccgatgccgcccggcgccgagccgccacgtttcggtggtccgcagcgtccgccg
caggtcccggcaccgcgccccggccacgacgggaacgcgggcccccagcagccgcagcgt
ccgcagcagcagcctccggtgcggccggtggagcacgcgccgcagcaggcacctcaggac
cgcggcgggaacgtcctgcccaaggacaccgagcttccgaaggacaccgaggctcccaag
gacacgaacgtcccgaaggacaccgagctcccgaaggacgtcgagtccccgaaggacact
gaggcgccccaggacgtcactcccgacgacaggaccacggtcgacgagccgtacctgacg
gatccggacttccacacggacgatcccgccgcctaccgcgcgctcgccgagacgcagatc
gacaagcgcggtttcgacaaggacaccggggaagcgcggagcgaacaggtccgccgcgaa
ggtctagccaaacgcgacgcccacgaagatccgcgcgtcaaggagatgtcggatcagggc
gcctacgcggtgcacagctacacgcgcaccgacatggccgagcggatcacgcatgcccag
cggcacggcggcgcggagctggaagcgctgcgtccgcatatcgaggcgatcacgtccggt
ctcaacgagatgcccgcctacgaggggctcgtctcgcggcgggtgaacttcaacggcaac
gagagcgcgatccgggccttcctcgaagcgcacgccaagggccaggtcatcgtcgacccg
cagatgctgagcacgtcgcgggtcacccccgaacatccgcacagcaacttccccggcgaa
gtcgagatgcgcatccagtcgaagaccgggcgccacatcgaggacctcgcctcgaagaag
gaagaacgcgaagtcctgatgaagtcggcgacgcagctgcgcgtcaccgacgtcaagatg
ggcccggggcatcccgagcacccggactacaagaagcgcctcgatgacggatcgcccaac
gaactgccgaagtggatcgtcgaatgcgaagaggtcgtcgccggtgacgacggccatctg
agcccggacgaggtccaccagaaggtcgccgagcggcgcgactacaacaacgccgtgcag
gaacggttggcgcaggaagccgccgaccaggaagcccagctgcgtcgcgagcacccggag
ctgttccagggccagggcctcgcggggctcgaaaccaagctggccgacggcaagggcggc
tggatcgacgccaccgacgccccggtccgggacgcccccgagccgccgaaggagcacgct
cccgacggcggctggtccgagctggcgaagccgctcgaagagggcgggacgccggtcatc
cacgccggttcgaccgagacgccgcaccagcaggtccggctggtcatggacgagatcccc
gcgatcggcgaggccaacacgcgcaactactacgcgcccgagtcgtggaaggacggctac
cagacgaactcggccgaggcgctggtcgcgttcgaagaccggatgaacggcggcgactcg
gtcgccgcgccgtcgaccggcggttcaccgctgcagcacgtcagcgaccggctcggcggg
cagtggtcggatcggaacggtttcgccgatatcgcacgtgagctgggcgaacgtccggtc
ggcgcgcggaccgcggtggcgttcgagcatcacgccgccgccgatccgaacgcgccggag
ggctcgccgcggtccaaggaccggatcgagacccggatcgtcgccgcggtgaacacgccg
cacggcgtggtcttcgccgacccgatgaccgggcggctcgcgacgctgcccgacgatccg
acgtcgatcaaggcgatgccgatgggcggcggcgacgccccgcacacgccggaaacgccg
cacaccgacaggtccgccgactccgaaacccccgtccaggagcaggcgcccaagaccgaa
ctcgacatcgccgagcggctcaagggcccggaagaaactcccacgcgagtcgacgagagc
tacctctccgacgacggcttccgtggcacgccggaggatcacaagagcctccgtgaccgt
tacgacagcgccgaactcgccgaacaggctcgcgaaaaggcgctcaagcggctcgaagcc
agcccgctgaaggaccgcgtctcccctgaggccgccgaagcgatctactcctactcgcgc
gaacacgcgtacgcgatcaacgacgcgaaccgccggggtgaagcgcaccccgacttcgag
aacgcccagcgcagcaccagggcgatcgtcggcgcgctcaacgagctgccggacttccac
ggcgaggccatccgcggcatcgacaccaagggtgacatgcgggccgccgcgatcatggcg
gcgcactacgaacccggccagaccgtccccgagccgacgatgaccagctcgaccatcaag
acttcgtcggacacgaagtcgaagttcggcgaagacgtcgagatccacatcgtctcgaag
acgggcaaggacgtctcgtcgctcgccgaaaacccgcgcgagaacgaggccatcaacaag
ccggccacgcagctttacgtgcacagcaaggagttcaagactccgccgctggtcgaccgg
ccgaagtgggtcatccacgccgaagaggtcacgcccggcgacccgcgctacctcgacccc
gagaccgccaagcagaagatggacgagcggcgggcccggcacgccgcggaggcgccggaa
ctcgcgcgtctggcccaggcgcagtcgatggcgcgcctcggcggcttcgacgagccgcag
actccgcacttctccacggagaacccggcggaccacggcgtcgcggacgtcgaaaagggg
cccgagtacggcgaccagccagctcaagaccactcggccaccgacgacacgctcgaactg
cctgcccccgagcgggactactcgtcgatggcggtcgcgacgaacccgccgagcgaaccg
gcgatccacgccggctcggcgagccccgcgcagcaggccgcgtacctcgccgaccggcac
ccgcggctcggcgaggtcaacccgcatttcaacgaccccgacgcgttggcgaacggctac
cgctccaactgcacccgcacgccgggcgcgtacatggaccggctgaacggcatcgactcg
accgccgaaccgctgctcgtccacgagatggacagccggggcacgctggagcacgtcgaa
gagcggttcggcggggagttctccgaccgcgccgactacgacaccgtcatccgcgagatg
cgggacatgccgaccgatcaccacgcggtcgtggcggtgaagtacctcgacgagaacggc
gtcgagcgcgggcacgtcgcgatggtggcgaatacgcgggacggcgtcgcgttcatcgac
ccgcagtccggcgcgctgatgaacctgccgcagccgccgctgggcgtgaagctgatgcac
gtcggcgtcccggaaggcccggccgcgcagcccgtcgacccgcggatcgcgttcgccagg
gatgacacgcccgacgtgccgccgtcgaggatcgggccggacggccgtccgatcgtgaca
ccgccgctcgacgcgggctacggcatggcgcacgacgagcagccaccgggcgaccgggcc
gaggccgagcggttcctgaacgatcccgaggtcgcggccgcggtggacgggctggacccg
gacaagaagcgggccgtccacgaggacgaaaacggggtcaagcacgacgtcgggccgatg
cgggacttaatccgcgagcatctgcccgcgcatccggagctcgtccggctgatggagcat
ccggacaacgcgtacctgcgggcttcgctgctgaacaacccgatgaccatcggcagcctg
ctgctgcacccggaggccatcccgatcctcgaagacgccctgcgtgacgtcgaggaacgc
ggctaccagatgatcgacgacgtccgtgaggacggtcccggcgacactccgctgacccag
gagcagcgggacctcgcgaacgcggcggcggatatcgccgccgacgtggagcccggcgat
cagtaccacgccggcttcgatcgcgcggacaagggcgatcccgggaagatccaggaattc
ctggacgccgagcgggaggcatggccgcggaatcagggcgacctcaaccggatcgccgaa
cggatcgcggaggagaacaacggtgacgcgtcgggcaggcccggtccgaaggacgacgac
cgcgcgaaggcgaagatcgcgggctacgacggagacgcgtcgaaactgaccgacctggtg
ggcgtgaaaatccagttcgacacgctggccgacgtctacaacgcgctgagcgcggtgatg
gacgatccggacctccggatcgtcagcttcgacgaccggttcgcgaatccgcaggacagc
ggataccgcgatctgcagatgaacgtccggctgccgaacgggcacgtcgccgaactgcgg
ctgcacctgaagcacatcgacaccgtgtcggcctacgagcacgccttgtacgaggtccgc
cgcgacttcccgacgtacaaccggacactggacgagaacaacaagaagaggttgtccccg
gaacaggccctgctggaagccgcgttgatggaccgggtccgggagaagttcatggccggt
ctccgcaagggcctgcctcctgaggagaacacgtga
DBGET
integrated database retrieval system
