Amycolatopsis coloradensis: LCL61_09720
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Entry
LCL61_09720 CDS
T10308
Name
(GenBank) DNA repair helicase XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
acor Amycolatopsis coloradensis
Pathway
acor03420
Nucleotide excision repair
Brite
Enzymes [BR:
acor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCL61_09720
Transcription machinery [BR:
acor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LCL61_09720
DNA repair and recombination proteins [BR:
acor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LCL61_09720
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WYW15832
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Position
complement(2087839..2089485)
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AA seq
548 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDNSQADDARIAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALTTYSRFPVPQPLLIDIVDTMGRFGRLQIANHPAHGLVMSTIDRAVLEEIL
RHKKISPMLGARIDEDTVVVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIDLAEVDW
ELRDYQRKAAEAFWAGGSGVVVLPCGAGKTLVGAAAMAHAKATTLILVTNTVAGRQWKRE
LVARTSLTEEEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYKHLDLFDSRDWGLVVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAP
AECTEVRVTLTDAERLAYATAEAEERYKLAATADTKTKVIKSLIDRHPGEPTLVIGAYLD
QLEMIGDELDAPVIQGATKNKEREELFDAFRRGEISTLVVSKVANFSIDLPEASVAIQIS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSVVSRDTVDTEYAAHRQRFLAEQGYAYRIVD
ADDLLRPM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatggcccgctgatcgtccagtccgacaagaccgtgctcctcgaggtcgacaac
agccaggccgacgacgcgcggatcgccatcgcgccgttcgccgaactggaacgcgcgccc
gagcacgtccacacctaccggatcacgccactggcgttgtggaacgcccgcgcggcgggc
cacgacgccgaacaggtcgtcgacgcgctgacgacgtactcgcgcttccccgtcccccag
ccgctgctcatcgacatcgtggacacgatggggcggttcgggcggttgcagatcgcgaac
cacccggcgcacggcctggtgatgtcgaccatcgaccgcgcggtgctggaggagatcctc
cggcacaagaagatcagcccgatgctgggcgcgcggatcgacgaggacaccgtcgtcgtg
cacccctccgagcgcgggcggctcaagcaagcgctgctgaaggtcggctggcccgcggaa
gacctcgccggctacgtcgacggcgaggcgcacccgatcgacctcgccgaggtcgactgg
gaactgcgggactaccagcgcaaggccgccgaggcgttctgggccggcgggtccggtgtc
gtcgtgctgccgtgcggcgcgggcaagacgctggtcggcgccgcggccatggcgcacgcg
aaggcgaccacgctgatcctggtgacgaacaccgtcgccggacggcagtggaagcgggag
ctggtcgcgcggacctcgctcaccgaggaggagatcggcgaatactccggggagaagaag
gagatccggccggtcaccatcgcgacgtaccaggtggtcacgcgcaagaccaagggcgag
tacaagcacctggacctgttcgactcgcgggactggggcctggtggtctacgacgaggtc
cacctgctgcccgcgccggtgttccggatgaccgcggacctgcagtcgcggcggcggctg
ggactcaccgcgaccctggtgcgcgaggacgggcgcgagggcgacgtgttctccctgatc
ggcccgaagcggtacgacgtcccgtggcgcgacatcgaggcgcagggctggatcgcgccg
gcggaatgcaccgaggtccgggtgacgctgaccgacgccgagaggctcgcgtacgccacg
gccgaagccgaggagcggtacaagctggcggcgaccgcggacaccaagaccaaggtgatc
aaatcgctgatcgaccggcatcccggcgagccgacgctggtcatcggggcctacctcgac
cagctggagatgatcggcgacgaactcgacgcgccggtgatccagggcgcgacgaagaac
aaggaacgcgaggaactgttcgacgcgttccgtcgcggcgagatcagcacgctggtcgtt
tcgaaggtcgcgaacttctcgatcgacctgccggaggcgtcggtcgcgatccagatctcc
gggacgttcggctcgcggcaggaagaggcgcagcggctcggacggctgctgcggcccaag
ggcgacgggcggcaggcacatttctactcggtcgtctcgcgggacaccgtcgacacggag
tacgcggcgcaccggcagcggttcctggcggaacaggggtacgcgtaccggatcgtggac
gcggacgacctgctgcgccccatgtag
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