Amycolatopsis coloradensis: LCL61_12245
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Entry
LCL61_12245 CDS
T10308
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
acor Amycolatopsis coloradensis
Pathway
acor00300
Lysine biosynthesis
acor00470
D-Amino acid metabolism
acor01100
Metabolic pathways
acor01110
Biosynthesis of secondary metabolites
acor01120
Microbial metabolism in diverse environments
acor01230
Biosynthesis of amino acids
Module
acor_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LCL61_12245
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LCL61_12245
Enzymes [BR:
acor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LCL61_12245
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WYW16319
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All DBs
Position
2585224..2586531
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AA seq
435 aa
AA seq
DB search
MSEAVLDQRITLSPALQEALHEVGTPAYVYDLAEVRRNARRLRAALPEGSGLYYSLKANP
HPELLRELRKAGARPEVCSPGELDATLDAGWPAADALYTGPGKRDADVAAALRSGVREFS
VDSPAALDQLDRIAAGLGVKAQCILRINDDRPTPGQRLAMTGVPSQFGADTGWVLDEPAR
FAGRPNASVVGLHLYMGTNLVATEDLVAQFGHALRTAGRLVAALEAAGAAIKVLDLGGGF
GAPFARAGAAVEFDGLRERLEDLFDDGVPGWRAGHPAIVFESGRYLVGTAGTLVTAVLDT
KRSHGREIVVLESGINHLGGMSGLRRLPPLVPHLLTVGHASGPADTAEATVVGPLCTPLD
TWARSIPLPRLAPGDLLAVPNTGAYGLYASLLAFLGHPAPAEIVIDSDLPGSPVVDASRL
HLTRAPVRHGATGKE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggtgctggaccagcggatcaccctgtctcccgcgctccaggaagcgctt
cacgaggtgggcacccctgcctacgtttacgacttggccgaagtgcggcgcaatgcgcgc
cggctgcgggccgcgctgcccgaggggtccggcctctactactcgctcaaggcgaacccc
cacccggagctcctgcgtgagctgcggaaagccggggcgaggcccgaggtgtgctcgccg
ggtgagctggacgcgacgctcgacgcgggctggcctgccgcggatgccctgtacaccggg
cctggtaagcgggacgccgacgtggcggccgccctgcggtcgggtgtccgggagttctcg
gtggattcgccggcggcgttggaccagctggacaggatcgccgcgggtctcggcgtgaag
gcgcagtgcatcctgcggatcaacgacgaccggccgacgcccggccagcggctggcgatg
accggcgtgccgtcccagttcggcgcggacaccgggtgggtgctcgacgagcccgcgcgt
ttcgcgggccgtccgaacgcgtcagtggtgggactgcacctctacatgggcacgaacctg
gtcgccaccgaggacctcgtcgcccagttcggccacgcactgcgtaccgcggggcgcctg
gtcgcggcgctggaggcggccggggccgcgatcaaggtgctcgacctcggcggcggcttc
ggcgccccgttcgcgcgggcaggcgccgccgtcgagttcgacgggctgcgcgaacggctg
gaggacctgttcgacgacggcgtgcccggctggcgtgccgggcacccggcgatcgtgttc
gagtcgggccgctacctggtcggcacggctggcacgctcgttacggccgtgctcgacacg
aaacggtcacacggcagggagatcgtcgtcctcgagtcgggcatcaaccacctcggtggc
atgtccggcctgcgcaggctgccgcccttggtgccccacctgctcaccgtcggccacgcg
tccggtcctgccgacacagccgaagctacggtcgtcggcccgttgtgcactcccttggac
acctgggcgcgcagcatcccgctgccaaggctcgcgccgggagacctgctggcggtcccc
aacaccggggcctacggcctgtacgcgagcctgctggccttcctcggccaccccgccccg
gcggagatcgtcatcgacagcgacctgcccggctcgccggttgtcgacgcctcccgccta
cacctcacgcgcgccccggttcgccatggtgccacaggaaaggaatga
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