Amycolatopsis coloradensis: LCL61_13035
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Entry
LCL61_13035 CDS
T10308
Name
(GenBank) DNA/RNA non-specific endonuclease
Organism
acor Amycolatopsis coloradensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF8616
Endonuclea_NS_2
EspA_EspE
PPE
WXG100
WXG100_2
DUF6620
Motif
Other DBs
NCBI-ProteinID:
WYW16473
UniProt:
A0ACD5BAR2
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All DBs
Position
complement(2747290..2751882)
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AA seq
1530 aa
AA seq
DB search
MPEGNPLVAKAPTDGDGPGPLTAGNSEYGYAAGIGVAESAMDAFNGISNGDWIGGGLGVL
SLAGEMASAAIDPFGYLMSSVASFLMEHMQPLKDMLDAVAGDPPVIQSYSETWGNVAKKL
EDTQVEFSNAVKNGTSGWTGDAADQYRKQAAEQAEAISGAATVAGAISTVVMIFGEIVAF
VREFIRQLIADAVGKLIAWVMETVFSLGFGTPVVVAQAVTAIAKWAAKIADKLKELCDAM
RRVSPLLGKLADVFEKIIKIFGKIAGKVTGLDVINTRNIKPGGFIQRGGSGGGSGGTGGG
GSGSGDGPDGDGSGSGSGDGSGSGSNGDNSGGNSGDTNSGPNDGSSGDTPSNTTRGGDGG
GSSTRSDAGSPNRTGDGPSTSDGNSAGGDGSPSTARSDTSTPHTRSDGGSPGDSATPNRA
SDGGSPTPNRPDTGGSPAPHTRTDTGGSPSHTPDSGSPAPHTRADTGSSPSHTPDAGSPA
PHTRTDTGGTPSHTPDSGSPTPHTRTDTGGSPSHTPDSGSPAPHTRADTGSSPSHTGDGG
GSPRTHGGDGGSPTPRSDPSPGHHGGNDGGSPTRPTDSGTTTSGTAPTAPRLGDAGPSHM
PSQRGGPGGDASHGVPPQGGQPIAGGMPPQGAPGGTPVGTPGSPGGRQQGGGWTGTPGSP
RTPDTNAPRTPDTHTGPSRGPGQTGPGGRPNQPHQPQPVARGNDFGPGVQPHTGSPSTHG
PGNRPGGTGPGNTGPGGRGPGGHSGPPRSPDGHGPDGHGPRQDPNGHPDGTPHDRGPDVE
PDRPLTPDEVNQRHSESTPAGSSYHRGDSDMGDLPHRVQPDPDGRYTVDVHVTPDGHARI
GNRTYTPEEFADILRRNGDYDGRPIRLIGCDAGSNDFARRLSRELDTEVMAPSKPAWTDS
NGRVFSSDYEIGPDGRPRPKIPPNGEWDVHSPDGTARRASDDGFTPDTSHADKQDVDADS
SRSRGDGDDDTSSRRDQPPPGADPDTTPRRQDPPPSADTDTGIPKDRNPHSVQQEADLLD
DTRQQNIHRNPQHQSDFDPPTPPNATPSRIGGPDPDTDIRPPARGERFPGEQKLERNRAY
EVFDDAGNRRGVYHTDGTGRVTHIDTHHPNEQPRVKKEDANGNVVYEPNPKYNPNPDVAD
PHPNTTYRVEIEGRHQTFATDADGVPHPSVKFHRPDFVGDPVTVGPGHPHAPDPKASFAS
GGPYAPHTQYKVTDSAGVHRGTFYTDAKGHVRWADLESGRMMRTNPDIDANRKHGIGEGD
PIVRQRLDPKAEVPHGAKDPDRFRGNEQVDVTLRRGESFLDSLPKDADGKPQLEPNKKYV
VSSEYRNPGRETHTRSIYWTDEHGNVVVETYRPSSPDLNNPAPNMVYNVDGGKFVYHTGP
EFDGGKVDTVRGRANDLKLQEDGAAPNRDPSAQDTSNKQAAGTPGKYDGGHLFGKQFDSP
GELLNMMAQWRPQNQGRKIAGPDHWHAFESDLASFLEKDKNRKIEGMEVFPMRDGSQVPH
TIQVRWIEVDEFGNRNVHMRSFPNNPPAST
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggaaacccgctcgtcgcgaaggcaccgaccgacggcgacggtcccggaccg
ctgacggccgggaacagcgagtacggctacgcggcgggcatcggcgtcgccgagtcggcc
atggacgccttcaacggcatctcgaacggtgactggatcggtggcgggctcggcgtgctg
agcctcgccggcgagatggccagcgccgcgatcgacccgttcggctacctgatgtcgtcg
gtggcgtcgttcctgatggaacacatgcagccgctcaaggacatgctggacgcggtcgcc
ggcgatccgccggtcatccagtcgtactccgaaacctggggcaacgtcgccaagaaactg
gaagacacccaggtcgagttctcgaacgcggtcaagaacggcacgtccggctggacgggc
gacgcggccgaccagtaccgcaagcaggccgcggaacaggccgaggcgatcagcggcgcg
gcgacggtcgcgggggcgatcagcaccgtcgtgatgatcttcggcgagatcgtcgcgttc
gtccgcgagttcatccgccagctgatcgcggacgcggtcggcaagctcatcgcgtgggtc
atggagacggtgttctccctcggcttcggcacccccgtggtggtcgcgcaggccgtcacc
gcgatcgccaagtgggccgcgaagatcgccgacaagctcaaggaactctgcgacgcgatg
cggcgggtctcaccgctgctgggcaagctggccgacgtcttcgagaagatcatcaagatc
ttcggcaagatcgcgggcaaggtcaccggcctcgacgtgatcaacaccaggaacatcaag
ccgggcgggttcatccagcgcggtggcagcggcggcggatccggtgggaccggcggtggc
ggctcgggctccggcgacggcccggacggcgacggttccggttccggcagcggcgacggg
tccggcagcggctccaacggcgacaactccgggggcaactccggcgacaccaacagcggc
ccgaacgatggctccagcggagacaccccgtcgaacaccacccgcggtggtgacggtggc
ggctcgtccacccgctccgacgccggctctcccaaccgtaccggcgacggaccgtccact
tcggacggaaactccgccggtggtgatggttcccccagcaccgcccgttccgacacgtcg
acgccgcacacccggtccgacggtggctctcccggagactccgccaccccgaaccgcgcg
tccgatggcggctcgcccaccccgaaccgcccggacaccggcggatcgcccgccccgcac
acgcggacggacaccggcggctcccccagccacacccccgacagcggctccccggcacca
cacacccgcgccgacaccggcagctccccgagccacacccctgatgccggttcgcccgcc
ccgcacacgcggacggacaccggcggcaccccgagccacacccccgacagtggctcgccc
accccgcacacgcggacggacaccggcggctcccccagccacacccccgacagcggctcc
ccggcaccacacacccgcgccgacaccggcagctccccgagccacaccggcgacggcggc
ggctcgccccggacacacggcggtgacggcggctcgcccactcctcggtccgacccgtcg
cccggccaccacggcggcaacgacggcggcagccccacccggccgaccgacagcggaacg
acgacgagcggcaccgcgcccacggcaccacgcctcggcgacgccggcccgtcacatatg
ccttcgcagcgcggcggtcccggcggcgacgcttcgcacggtgtcccgccgcagggcggc
cagccgatcgccggcggcatgccaccgcaaggcgctccgggtggcacgcccgtcggcacc
ccgggttcgcccggcggcaggcagcagggtggcggctggacgggaacgcccggttcgccg
cgcaccccggacacgaacgccccgcgcacacccgacacccacaccggccccagccgcggt
cccggccagaccggtcccggcggacggccgaaccaaccgcatcagccgcagccggtcgcc
cggggcaacgacttcggccccggcgtccagccgcacactggctcaccgagcacacatggc
ccgggcaaccggcccggcggcacgggtcccggcaacaccggtccgggcgggcgcggcccc
ggtggtcactccgggccgccgcgttcgccggacggtcacggccccgacgggcacggaccg
cgccaggacccgaacggtcaccccgacggcacaccgcacgaccgcgggcccgacgtcgag
ccggatcgtccgctgacgccggacgaggtcaaccaacggcattccgagagcactcccgcg
ggcagctcgtaccaccgcggcgactcggacatgggcgacctgccgcaccgcgtccagccg
gatccggacggccgctacaccgtcgacgtgcacgtgacgccggacgggcacgcccggatc
ggcaaccgcacctacaccccggaagagttcgcggacatcctgcgccgcaacggggattac
gacggccgcccgatccggctgatcggctgcgacgccggctcgaacgacttcgcgcgccgt
ctgtcgcgggagctcgacaccgaagtgatggcgccgagcaagccggcctggaccgactcg
aacgggcgtgtcttctcgtccgactacgagatcggtcccgacggccgcccccggcccaag
atcccgccgaacggcgaatgggacgtccacagccccgacggcaccgcccgccgggcgagc
gacgacggcttcaccccggacacctcgcacgcggacaagcaggacgtggacgccgacagc
tcccgcagccgcggtgacggcgacgacgacacctcgtcccggcgcgaccagccgccgccg
ggcgcggaccccgacacgacaccccggcgtcaggaccccccgcccagcgcggacaccgac
accggcatccccaaggaccgaaacccgcattcggttcaacaggaagccgatctgctcgac
gacacccgtcaacagaacatccatcgcaacccgcagcaccagagcgatttcgacccgccg
accccaccgaacgccaccccttcgcggatcggcgggccggaccccgacaccgacatccgg
ccgcctgcccgtggcgaacggttccccggcgagcagaaactggagcgcaaccgggcgtac
gaggtcttcgacgacgccggaaaccggcgcggtgtctaccacacggacggcaccggccgg
gtcacccacatcgacacccatcacccgaacgaacagccgcgcgtcaagaaagaggacgcg
aacggcaacgtcgtctacgaaccgaacccgaagtacaacccgaatcccgacgtcgcggac
ccccacccgaacacgacgtaccgggtggagatcgagggcaggcaccagacgttcgcgacg
gacgcggacggggtcccgcatccgtcggtgaagttccaccggccggacttcgtgggcgac
ccggtcacggtcgggcccggtcacccccacgcgccggaccccaaagcgtctttcgcgagc
ggcggtccgtacgcaccgcacacccagtacaaggtcacggactcggcgggcgtgcaccgc
ggcaccttctacaccgacgccaagggacacgtccgatgggcggacctcgagtccggccgg
atgatgcgcaccaacccggacatcgacgcgaatcggaagcacggcatcggcgaaggcgac
cccatcgtccgccagcgcctcgacccgaaagccgaagtaccgcacggtgcgaaggatccg
gaccgtttccgcggcaacgagcaggtggacgtcaccctccgccgtggcgagtcgttcctc
gattccttgcccaaggacgcggatggaaagccgcagctcgaaccgaacaagaagtacgtc
gtcagcagcgagtaccggaatcccggtcgcgagacgcacacacggtcgatctattggacc
gacgagcacggcaacgtcgtcgtcgagacctatcggccgtcgagccccgacctcaacaat
ccggcgccgaacatggtctacaacgtcgacggcggaaagttcgtctaccacaccggcccc
gaattcgacggcggcaaggtggacacggtgcgcgggcgtgccaacgatctgaaactgcag
gaagacggcgcggcgccgaaccgggacccgtcggcacaggacacgtcgaacaagcaggcc
gcggggacgccgggcaagtacgacggcggccatctgttcggcaagcagttcgacagtccc
ggtgagctgctgaacatgatggcccagtggcggccacagaatcagggccggaagatcgcg
gggccggatcactggcacgccttcgaaagcgacctcgccagcttcctcgagaaggacaag
aaccggaaaatcgaaggtatggaagtcttcccgatgcgggacggcagccaggtgccgcac
acgatccaagtacgctggatcgaggtcgacgagttcggcaaccgcaacgtccacatgcgc
agcttccccaacaatcccccggcgagtacgtga
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integrated database retrieval system
