Amycolatopsis coloradensis: LCL61_14775
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Entry
LCL61_14775 CDS
T10308
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
acor Amycolatopsis coloradensis
Pathway
acor02020
Two-component system
acor02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LCL61_14775
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LCL61_14775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acor03021
]
LCL61_14775
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
acor02035
]
LCL61_14775
Transcription machinery [BR:
acor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LCL61_14775
Bacterial motility proteins [BR:
acor02035
]
Flagellar system
Flagellar assembly proteins
Stator
LCL61_14775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
KORA
Motif
Other DBs
NCBI-ProteinID:
WYW16815
LinkDB
All DBs
Position
3097222..3098157
Genome browser
AA seq
311 aa
AA seq
DB search
MTRRPEPAAHAHPHEHGEHAESHAENGGPMTADPHVTEAAGKHRPGGDGPAVAPEARTGY
EVDAGIQALWREFTESPDQIVRDRLVLHYAPLVKYVAGRVGTGLPTHVDVGDLIQSGIFG
LVDAIEKFEPARGLRFETYAMQRIRGAILDDLRSQDWVPRAVRSKAREAERALERLGARL
NRTPTDAELAAELEISVDDLREFYGQMQLTSVIALEDLVAAGKDSGSLVDTLPDDGAVDP
VAVLVDQDNRRQLAQAIAQLTERDRIVVGLYYFESLTLAEIGKVLGVTESRVSQLHTRAV
MRLRAKLVEQA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgacccggcggcccgaaccggcggcgcacgcgcatccgcacgagcacggagaacacgct
gagtcgcatgctgagaacggcggtccgatgaccgccgacccacatgtcaccgaagccgcc
gggaaacaccgccccggcggggacggtcctgccgtcgcgcccgaagcgcggaccggctac
gaagtggacgccgggatccaggcgctgtggcgtgagttcaccgagtctcccgaccagatc
gtgcgcgaccggctcgtgctgcactacgccccgctcgtcaagtacgtcgccggccgggtc
ggcaccgggctgccgacccatgtcgacgtcggagacctgatccaatccgggatcttcggc
ctggtcgacgcgatcgagaagttcgaacccgccaggggcctgcgcttcgagacctacgcc
atgcagcgcatccggggcgcgatcctcgacgacctccgctcccaggactgggtccccaga
gcggtacgcagcaaggcccgcgaagccgagcgcgccctggaacgccttggcgcccggctg
aaccgcaccccgaccgacgccgagctcgcggccgagctcgaaatcagcgtcgacgacctt
cgtgagttctacggccagatgcagctgaccagcgtcatcgcgctggaagacctggtcgcc
gcgggcaaggacagcggctcgctggtcgacaccctgcccgacgacggcgccgtcgacccg
gtggccgtcctggtcgaccaggacaaccgccgtcagctcgcgcaggcgatcgcccagctc
accgaacgcgaccggatcgtggtcggtctgtactacttcgaaagcctgacgctcgccgag
atcggcaaggtcctcggcgtcaccgagtctcgggtcagccagctgcacacccgcgccgtc
atgcggttgcgcgccaaactggtcgagcaggcctag
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