Amycolatopsis coloradensis: LCL61_16000
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Entry
LCL61_16000 CDS
T10308
Name
(GenBank) RNA 2'-phosphotransferase
KO
K07559
putative RNA 2'-phosphotransferase [EC:2.7.1.-]
Organism
acor Amycolatopsis coloradensis
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acor03016
]
LCL61_16000
Transfer RNA biogenesis [BR:
acor03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LCL61_16000
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Paralog
GFIT
Motif
Pfam:
PTS_2-RNA
PARP
VapC50_C
Motif
Other DBs
NCBI-ProteinID:
WYW17053
LinkDB
All DBs
Position
complement(3349763..3350311)
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AA seq
182 aa
AA seq
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MDKKNLIRVSKRLSRHLRHAPGDIGITLTPDGWVDVDTLLAALRRNGLPLTRTELDEVVE
GKNKRRFAFDEAGLRIRASQGHSVDVDLALPAAIPPEVLYHGTVSRFLDAILHEGLRPMK
RHAVHLSATVDTARAVGARRGVPVLLAVDAREMSAAGHEFQVSANGVWLTAAVPPEFLRR
LP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaagaacctcatccgagtctcgaaacggctctcccggcacctgcggcacgca
cccggcgacatcgggatcaccctcacccctgacggctgggtcgacgtcgacacgctcttg
gcggccttgcggcgcaatggtttgccgctcacccgcaccgaactcgacgaagtggtcgag
ggcaaaaacaaacggcgcttcgctttcgacgaggccgggctgcggatccgtgccagccag
ggccacagtgtcgacgtcgacctcgcactgcccgccgcgatcccgccggaggtgctctac
cacggcacggtctcccggttcctcgacgcgatcctgcacgagggactccggccgatgaag
cggcacgccgtgcatctctcggcgaccgtggacaccgcgcgggccgtcggggcgcggcgc
ggcgtccctgtgctgctcgccgtggacgcccgggagatgtccgccgccggtcacgaattc
caggtgagcgcgaacggcgtctggctcaccgccgccgtcccgccggagttcctccgcaga
ctcccttag
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