Amycolatopsis coloradensis: LCL61_20165
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Entry
LCL61_20165 CDS
T10308
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acor Amycolatopsis coloradensis
Pathway
acor03030
DNA replication
acor03410
Base excision repair
acor03420
Nucleotide excision repair
acor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCL61_20165 (polA)
03410 Base excision repair
LCL61_20165 (polA)
03420 Nucleotide excision repair
LCL61_20165 (polA)
03440 Homologous recombination
LCL61_20165 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acor03032
]
LCL61_20165 (polA)
03400 DNA repair and recombination proteins [BR:
acor03400
]
LCL61_20165 (polA)
Enzymes [BR:
acor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCL61_20165 (polA)
DNA replication proteins [BR:
acor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LCL61_20165 (polA)
DNA repair and recombination proteins [BR:
acor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LCL61_20165 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCL61_20165 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WYW17867
LinkDB
All DBs
Position
4287784..4290525
Genome browser
AA seq
913 aa
AA seq
DB search
MSPSENTTVANATPATAQAERPKLLLIDGHSMAYRAFFALPAENFKTKTGQTTNAVFGFT
SMLINLLRDEAPTHLAVAFDLSRKTFRSETYAEYKANRSTTPDEFKGQVGLVEDVLKVLG
IPALTKENYEADDIIATLTTQATAEGFDVLICTGDRDALQLVTDQVTVLYPKRGVSEMTR
FTPEAVEEKYGLTPAQYPDFAALRGDPSDNLPSIPGVGEKTAAKWIRQFGSFNELVDRVD
EVKGKVGDALREHLGAVMLNRQLTELIRDVELELGPTMLELRPWDREAVHALFDELEFRV
LRDRLFATLQSAEPEAEEGFEVSGSKLAPGALTEWLSAHTGQDQPVGLAFRTTGASVRSD
LKALTFAAADGEGAYVDVTAMDAEDDKALTAWLADEKIKKIGHELKVPLHAVRARGWTFA
GLVMDTALAAYLVRPGQRTFELDDLALRYLHRELRSEADTGDGQLSLLDGGAEDMEQKEI
QAELVKARAVAELAGALTKELEELGGAQLLAELELPLLQVITGLEAAGIAVDIEHLTDLE
AHYLGRVTQAAEEAYAVIGKQVNLGSPKQLQVILFDELGMPKTKRTKTGYTTDAEALQSL
FEKTEHPFLQHLLEHRDATRLRTTVEGLIKSVADDGRIHTTLLQTIAATGRLSSVDPNLQ
NIPIRTEEGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDEGLIQAFNSGEDLHTF
VASRAFSLPPEEITPELRFRVKAMSYGLAYGLSAYGLSQQLRISTEEAKEQMEAYFSRFG
GVRDYLHSVVGDAAKVGYTETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADII
KVAMLNVHKALTEAKLKSRVLLQVHDELVLEVADGEREQLESLVRQGMGSAYELAVPLEV
SVGYGRSWNDAAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgagtgagaacacgaccgttgccaacgccacacccgccaccgcacaggccgag
cggcccaaactgctgctgatcgacggccattcgatggcgtatcgcgcgttcttcgcgctg
cccgcggagaacttcaagacgaagaccgggcagacgacgaacgcggtcttcgggttcacc
tcgatgctcatcaacctgctgcgcgatgaggcgccgacccacctcgcggtggcgttcgac
ctgtcccgcaagacgttccggtcggagacgtacgcggagtacaaggccaaccgcagcacc
accccggacgagttcaagggccaggtcgggctggtcgaggacgtgctgaaggtcctcggc
atcccggcgctgaccaaggagaactacgaagccgacgacatcatcgccacgctcacgaca
caggcgaccgccgaaggtttcgacgtcctcatctgtacgggcgaccgtgacgcgctccag
ctggtgaccgaccaggtcaccgtgctgtacccgaagcgcggcgtgtcggagatgacccgg
ttcaccccggaggcggtcgaggagaagtacggcctcaccccggcgcagtacccggacttc
gccgcgctgcgtggcgacccctcggacaacctgcccagcatccctggtgtcggtgagaag
acggccgcgaagtggatcaggcagttcggctccttcaacgagctggtcgatcgggtcgac
gaggtcaagggcaaggtcggcgacgcgctgcgcgagcacctcggcgcggtcatgctgaac
cgccagctcaccgagctgatccgcgacgtcgagctggagctcggcccgaccatgctcgag
ctgcgcccgtgggaccgcgaggccgtccacgcgttgttcgacgagctcgagttccgcgtc
ctgcgggaccggctcttcgccaccctgcagagtgccgagcccgaggccgaagagggtttc
gaggtcagcggttcgaagctcgcgccgggcgcgctcacggaatggctctccgcgcacacc
ggccaggaccagccggtcggcctggcgttccgcaccaccggggcctcggtccgctccgac
ctgaaggccctcacgttcgcggccgcggacggtgagggcgcgtatgtcgacgtcaccgcg
atggacgccgaggacgacaaggcgctcacggcctggctcgccgacgagaagatcaagaag
atcggccacgagctcaaggtcccgctgcacgccgtccgcgcgcgcggctggacgttcgcc
gggctcgtcatggacaccgcgctcgcggcgtacctggtccgccctggccagcgcactttc
gagctcgacgacctggccctgcggtacctgcaccgtgagctgcggtccgaggccgacacc
ggggacgggcagctttcgctgctcgacggtggcgccgaggacatggagcagaaggagatc
caggccgagctggtcaaggcccgcgcggtcgccgaactcgcgggcgcgctgaccaaggag
ctcgaagaactgggcggcgcgcagctgctcgccgagctcgaactgccgctgctgcaggtg
atcaccggcctcgaagcggcgggtatcgcggtcgacatcgagcatctgaccgatctggaa
gcgcactacctcggccgggtgacacaggccgcggaggaggcgtacgcggtcatcggcaag
caggtcaacctcggttcgccgaagcagctgcaggtcatcctgttcgacgaactcggcatg
ccgaagaccaaacgcacgaagaccggctacaccaccgacgccgaggcgctgcagagcctg
ttcgagaagaccgagcacccgttcctgcagcatctgctggagcaccgggacgcgacccgg
ctgcgcaccacggtcgagggcctgatcaagtcggtcgccgacgacggccgcatccacacc
acgctgctgcagacgatcgccgccaccggacggctctcgtcggtcgacccgaacctgcag
aacatcccgatccgcaccgaggaaggccgccgcatccgcgacgccttcgtcgtcggcgac
gggtacgccgagctgatgacggcggactacagccagatcgaaatgcggatcatggcgcac
ctctcgcaggacgaagggctgatccaggccttcaacagcggcgaggatctgcacactttc
gtggcgtcgcgcgcgttctcgctgccgccggaggagatcacgccggaactgcgcttccgg
gtgaaggcgatgtcgtacggcctggcgtacggcctttcggcgtacgggctttcgcagcaa
ctgcggatctcgaccgaagaggccaaggaacagatggaggcgtacttctcccgtttcggc
ggcgtgcgcgactacctccattcggtcgtgggcgacgcggcgaaggtcggttacaccgag
acaatcttcggccgccgccgttatctgccggacctcaacagcgacaaccggcagcgccgc
gaaatggccgagcggatggcgctcaacgcacccatccagggcagcgcggcggacatcatc
aaggtcgccatgctcaacgtgcacaaggcgctgaccgaggcgaagctgaagagccgcgtg
ctgctgcaggtccacgacgaactcgtcctcgaggtcgccgatggcgagcgcgagcagctc
gaatcgttggtgcgccagggaatgggctccgcctacgaactggcggtcccgctggaggtc
tcggtcggatacggccggtcctggaacgacgccgcgcattag
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