Amycolatopsis coloradensis: LCL61_20230
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Entry
LCL61_20230 CDS
T10308
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
acor Amycolatopsis coloradensis
Pathway
acor03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LCL61_20230 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
acor03011
]
LCL61_20230 (rpsA)
Ribosome [BR:
acor03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LCL61_20230 (rpsA)
Bacteria
LCL61_20230 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
Phage_T7_Gp15
DUF2110
SOGA1-2-like_CC
DUF3987
Motif
Other DBs
NCBI-ProteinID:
WYW17880
LinkDB
All DBs
Position
4304998..4306497
Genome browser
AA seq
499 aa
AA seq
DB search
MTTDTATAPTAPAGPQQVAINDIGSEEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLL
DIGYKTEGVIPSRELSIKHDVDPAEVVTVGDEVEALVLQKEDKEGRLILSKKRAQYERAW
GTIEELKEKDEPVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKI
IELDKNRNNVVLSRRAYLEQTQSEVRSEFLNALAKGQVRKGVVSSIVNFGAFVDLGGVDG
LVHVSELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWRQFARTHAI
GQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEIPEQVVQVNGDVMVKVIDIDL
ERRRISLSLKQANEGVTPETEFDPTQYGMAAEYDAEGNYIYPEGFDPDTQEWQEGFDKQR
EEWERQYAEAHTRYEAHMKQVQKAAEADAEAAADAATGVTSGDSGEQSYTSAPAEAKSGG
TLASDEQLAALREKLSGGA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacaccgccaccgccccgaccgcccccgccgggccccagcaagtcgctatc
aacgacatcgggtcggaggaagacttcctcgctgcgatcgacaagacgatcaagtacttc
aacgatggcgacatcgtcgaaggaaccatcgtcaaggtcgaccgtgacgaggtcctgctc
gacatcggctacaagaccgagggtgtcatcccctcgcgcgagctctccatcaagcacgat
gtcgacccggctgaggttgtcaccgtcggcgatgaggtcgaagcccttgtcctccagaag
gaggacaaggaaggccgtctgatcctgtccaagaagcgtgcgcagtacgagcgcgcctgg
ggcacgatcgaggagctcaaggagaaggacgagcccgtcaagggcaccgtcatcgaggtc
gtcaagggcggcctcatcctggacatcggcctccgcggcttcctgcccgcgtcgctggtc
gagatgcgccgcgtgcgcgacctgcagccgtacgtcggccgcgagctcgaggcgaagatc
atcgagctggacaagaaccgcaacaacgtggtcctgtcccgccgcgcctacctggagcag
acccagtccgaggtgcgcagcgagttcctcaacgcgctcgccaagggccaggtccgcaag
ggtgtcgtgtcgtccatcgtcaacttcggtgccttcgtggacctgggtggcgtcgacggc
ctggtgcacgtctccgagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgag
gtcggccaggaggtcacggtcgaggttctggacgtcgacatggaccgcgagcgcgtctcg
ctgtcgctgaaggcgacccaggaagacccgtggcgtcagttcgcccgcacccacgcgatc
ggccagatcgtgccgggcaaggtcaccaagctcgtcccgttcggtgcgttcgtgcgcgtc
gaggagggcatcgagggcctggtgcacatctccgagctggccgagcgccacgtggagatc
ccggagcaggtcgtccaggtcaacggcgacgtgatggtcaaggtcatcgacatcgacctc
gagcgtcgtcgcatctcgctgtcgctgaagcaggcgaacgagggcgtcacgccggagacc
gagttcgaccccactcagtacggcatggccgccgagtacgacgccgagggcaactacatc
taccccgaaggcttcgacccggacacccaggagtggcaggaaggcttcgacaagcagcgt
gaggagtgggagcgtcagtacgccgaggctcacacccgctacgaggctcacatgaagcag
gtccagaaggcagccgaggccgacgccgaagccgccgcggacgccgcgaccggtgtcacc
tcgggcgactcgggcgagcagagctacacctccgctccggccgaggccaagagcggtggc
acgctcgccagcgacgagcagctcgcggctctccgcgagaagctgtcgggcggcgcgtga
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