Amycolatopsis coloradensis: LCL61_25670
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Entry
LCL61_25670 CDS
T10308
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
acor Amycolatopsis coloradensis
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
acor03051
]
LCL61_25670 (pafA)
Enzymes [BR:
acor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LCL61_25670 (pafA)
Proteasome [BR:
acor03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LCL61_25670 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WYW18938
LinkDB
All DBs
Position
complement(5474555..5475913)
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AA seq
452 aa
AA seq
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MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLVQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTMLKVGSANLVLEMIEAGVQF
RDFTLDNPIRAIREISHDLTGRRQVRLAGGREASALDIQREYHARAVQHVKETGSSPQSE
RVVELWGRALEAVEQQDFSKIDTEIDWAIKHRLVERYRNKHDLDLSSPRIAQLDLAYHDI
RRGRGIFDLLQRKGLVRRVTDDGEIELAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatctttggcatcgagaccgagttcggggtcacgtgcacctttcacggg
caacgcaggctctccccggacgaagtggcgcgttacctgtttcggcgtgtcgtgtcctgg
gggcgttcgtcgaacgtcttcctgtcgaacggctcgcggctctacctcgacgtgggttcc
caccctgagtacgcgacggcggaatgcgacgacctcgtccagctcgtcacgcacgacaag
gcgggggagcggatcctcgaggacctcctggtggacgccgagcggcggctggcggacgag
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactacctggtgacccgggcgggtgagttctcccggatcgccgacgtg
ctgctgccgttcctggtgacccggcagctcatctgcggcgccggcaaggtgctgcagacg
ccccgcggcgccgtgtactgcctgtcccagcgagcggaacacatctgggagggcgtctcc
agcgccaccacgcgctcgcggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gaacgctaccggcgcctgcacgtgatcgtcggcgactcgaacatggccgagccgaccacg
atgctcaaggtcggatcggcgaacctggtgctggagatgatcgaagcgggcgtccagttc
cgcgacttcacgctggacaacccgataagggccatccgcgagatcagccacgacctcacc
ggacgccgacaggtgcggctcgccggcggccgcgaggcgtccgcgctggacatccagcgc
gagtaccacgcccgggccgtccagcacgtcaaggagaccggttcgtcgccgcaatccgag
cgcgtcgtcgagctgtggggccgtgcgctggaggcggtcgagcagcaggacttcagcaag
atcgacaccgagatcgactgggcgatcaagcaccgactggtcgagcgctaccgcaacaag
cacgacctcgacctgtcgagcccgcggatcgcgcaactcgacctggcctaccacgacatc
cggcgcgggcggggcatcttcgacctgctgcagcggaaggggctcgtgcggcgggtcacc
gacgacggcgagatcgagttggccaaggacacgccgccgcagaccacgcgggcgaagctg
cgcggtgacttcatcgccgccgcgcaggccgccgggcgtgacttcaccgtggactgggtg
cacctcaagctcaacgaccaggcacagcggaccgtgctgtgcaaggacccgttccgctcg
gtggacgaacgcgtcgagaggctcatctcctcgctctga
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