Amycolatopsis coloradensis: LCL61_28305
Help
Entry
LCL61_28305 CDS
T10308
Name
(GenBank) RICIN domain-containing protein
Organism
acor Amycolatopsis coloradensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LGFP
RicinB_lectin_2
Ricin_B_lectin
ALF
AbfB
CDtoxinA
Botulinum_HA-17
Motif
Other DBs
NCBI-ProteinID:
WYW19453
LinkDB
All DBs
Position
6045572..6048634
Genome browser
AA seq
1020 aa
AA seq
DB search
MFTAAVMAFSMLAAAPATAAPDVSPSTPAAPSPATPPAATPPAPMPLTVGALPGAPQKPA
RQAPKATLAQSTDAEKAKAAAILGIVAGPELLILTDRNFTAAMYYAADDLDKQKPLEPEH
RKVKDAAVAALGESDDACTTFIKSGMAAANVQDQAIVAERRARQEEERTAKAKAAALLGI
PADNTVLGKSVYEFIVYLDLHADNHKDTAVKEAARAALSGTAEAQWTFLTVGVFDEHSKD
VDRLIREDEAKSEAEKAAERAREAKANAAWHALGIRGDTALVNLSDQDFVIEIWSRAPRD
TEVHGAAEAAVRSRNPADWKAFIDHGAKDAHLRDIDNALRKRDEEYVRQITEIRTRAEKS
RLHPALVTAADTALGGSPVDRERFLRVGQDQNLSQSLRTFSTVSNNAYLTDSNGRATLTL
WQPGNHPEQAWKIEPGLSDPTCFSLQSTARPNNYLRWDKNKRGGGSPQEAYVTVSPTDGT
PAFKDEATWCLHPLMILFSPKGNDRLYLYPEGKSYAGTGWEVDTPVPPSPFDLTYRRDNY
ARERLGRAIADPVLDTNNLGYREHEHGRIYYTRYTRPVASITYSTGVVYNGPILDKFLAL
GGPNVLGGSIHSHTAAADGQILRLSYAFGSAESLFIAWSPATGAHEVHGGIGVTWSQTGD
VTGPLGYPTTDETGFGNGTGYYNRFTGGSVYWMPNIGGITITGDFHARHKALGYETGPLG
HPIESERQAQLAEASVPSVERQRFSTGALYRSQTNGVMAVHGEIYKKYAELGYESGFLGQ
PTSDTLTASDGVGKYVNFSNGTAIYWHPATGAHAIYGNIRARWNALGAEKSYLGYPTTDE
LPLPKGRRNVFQNGRIDWSNESGSTIDYKTVTMTPGSIELKNANGGRCIQVAGVGQDALR
DSAGTELWDCVAGAKQVWKLTPLGDNKYNLKNQNSGKCLDLAPNYNNGTSITQYTCHNGV
NQQWEFTTAANGTLALRSVYSAKVAEALGNGTANATPVGQWADLGNPNQRWTSIQINTTP
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaccgcagccgtcatggcgttcagcatgctcgccgccgcaccagccaccgccgca
cctgacgtcagccccagcacacctgcggccccaagccccgccacaccaccggccgcgacg
cctccggctccgatgcccctgaccgtcggcgcgctgcccggggctccccagaaaccggct
cggcaagcaccaaaggccaccctggcgcagtccaccgatgccgaaaaggccaaagcagcc
gccattctcggcatcgtcgccggcccggaactgctgatcctcaccgaccgcaacttcacc
gccgccatgtactacgcggccgacgacctggacaagcagaagccgctcgagcccgagcac
cggaaggtcaaggacgccgccgtcgccgctctcggcgagagcgacgacgcctgcaccacg
ttcatcaagtccggcatggccgcggccaacgtccaggatcaggcgatcgtggccgagcgc
cgcgcccggcaggaagaggaacgtaccgccaaagccaaagccgccgccctgctcggcatc
ccggccgacaacaccgtcctggggaagtcggtctatgagttcatcgtctacctcgacctc
cacgccgacaaccacaaggacaccgcggtcaaggaggcagcccgggccgcgctgagcggc
accgccgaagcacagtggaccttcctcaccgtcggagtcttcgacgagcacagcaaggac
gtcgaccggctgatcagggaggacgaggccaaatccgaagcggagaaagcggccgagcgc
gcacgagaggccaaggccaacgccgcctggcacgccctcggcatccgcggcgacaccgcc
ctggtcaacctcagcgaccaagacttcgtcatcgagatctggagccgcgcaccacgcgac
accgaagtccacggagccgccgaagccgccgtccgcagccgcaaccccgccgactggaaa
gccttcatcgaccacggcgccaaagacgcccacctacgcgacatcgacaacgcactccgc
aaacgcgacgaggaatacgtccgccagatcaccgagatccgcacccgcgcagagaagagc
cgacttcaccccgcgctcgtcaccgccgccgacaccgcgctgggcggatcgccggttgac
cgagaacgcttcctgcgcgtcggccaagaccagaacctatcccagtccctgagaaccttc
tctacagtatcgaataacgcttacctcaccgactccaacggccgcgcaacgctcaccctg
tggcaaccgggtaaccaccccgaacaggcgtggaagatcgaacccgggctctccgacccc
acctgcttctcgctacagtcgaccgcccgtcccaacaactacctccgctgggacaagaac
aaaagaggaggcggcagcccgcaagaggcctatgtgaccgtctctcccaccgatggcaca
cccgcgttcaaagacgaggccacatggtgcctccatcccctcatgatcctgttcagcccc
aagggaaacgacaggctctacctctacccggagggtaagagctatgccggcaccggatgg
gaagtggacaccccagtgccgccgtcaccgttcgacctgacctaccgccgcgacaactac
gcccgcgagcgtctcgggcgagcaatcgcagacccggtactggataccaacaacctcggc
taccgtgagcacgaacacgggcgtatctactacacccgctatacccgccccgtggccagc
atcacctacagtacaggagtcgtctacaacggccccatcctcgacaagttcctcgcactc
gggggcccgaacgtcctcggcggcagtatccactcgcacaccgccgctgccgacggccaa
atacttcgtctttcctacgcttttggaagcgcggagtctctctttatcgcctggagcccg
gccactggcgcccacgaagtccacggcgggatcggcgtcacctggagccaaaccggtgac
gtgaccggaccgctgggctaccccaccaccgacgagaccggcttcggcaacggcaccggc
tactacaaccggttcaccggcggatccgtctactggatgcccaatatcggcggcatcacc
atcacaggcgacttccacgcccggcacaaggccctcggctacgaaaccgggccactgggg
cacccgatcgaaagcgaacgtcaggcccagctcgccgaggcgagtgtcccgagcgtcgag
cgtcagcggttctccaccggcgcgctctaccgctcccagaccaacggggtcatggccgtc
cacggcgagatctacaagaagtacgccgaactcggctacgaatccggtttcctcgggcag
ccgacatccgacaccctcaccgcctccgacggggtcggcaagtacgtcaacttcagcaac
ggcaccgccatctactggcaccccgccaccggcgcccacgccatctacggcaatatccgc
gcccgctggaatgccctcggcgccgagaagtcctacctcggctaccccaccaccgacgaa
ctccccctgcccaagggccgccgcaacgtcttccagaacggacggatcgactggagcaat
gagagcggcagcaccatcgactacaagaccgtcaccatgacacccggttcgatcgagctc
aagaacgccaacggcggacggtgcatccaggtcgccggcgtcggccaggacgcactgcgc
gacagcgccggcaccgaactctgggattgcgtcgccggcgccaagcaggtctggaaactc
accccgctcggcgacaacaagtacaacctcaagaaccagaactccggcaaatgcctcgac
cttgcccccaattacaacaacggaacctcgatcacccaatacacctgccacaacggtgtc
aaccagcaatgggaattcaccaccgccgccaacggcaccctcgccctccgcagcgtctac
tccgccaaagtcgccgaagccctcggtaacggcaccgccaacgcgacacccgtaggccag
tgggccgaccttggcaaccccaaccaacgctggaccagcatccagatcaacaccacccca
taa
DBGET
integrated database retrieval system
