Amycolatopsis coloradensis: LCL61_35420
Help
Entry
LCL61_35420 CDS
T10308
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
acor Amycolatopsis coloradensis
Pathway
acor00300
Lysine biosynthesis
acor00470
D-Amino acid metabolism
acor01100
Metabolic pathways
acor01110
Biosynthesis of secondary metabolites
acor01120
Microbial metabolism in diverse environments
acor01230
Biosynthesis of amino acids
Module
acor_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LCL61_35420 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LCL61_35420 (lysA)
Enzymes [BR:
acor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LCL61_35420 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WYW20854
LinkDB
All DBs
Position
complement(7594556..7595989)
Genome browser
AA seq
477 aa
AA seq
DB search
MAHPAGPRHADVYPHADASGFPPSSPEELDRLYPKVWPRNTFRGGDGVVRIAGVDVRELA
EKYGTPLFVVDEADFKSRCADYAEAFDDPALVHYASKAFLSIEIARWVAEQGLSLDVCSG
GELAVAQRANFPAERITFHGNNKSLPELEAAVEAGVGTVVVDSYHEIARLADVAARNDVV
QNVLIRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNAPSLKLIGLHSHIG
SQIFDADGFEVAARRVVGLLAELAKEHGTDLLDQLSIVDLGGGFGIAYTDKDNPPPPAQM
ITQIREIVRKECEYAGLPVPKIAGEPGRAIAGPGTITLYEVGTIKDVSLGDKAARRYVSV
DGGMSDNIRTALYDAVYDCRLVSRSADDDGDGQASAALSRVVGKHCESGDIVVRDCWLPD
TLAPGDLLAVAATGAYCYSMASGYNRQPRPAVVAVRNGSARVLLRRETTDDMLRLEV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccccgcgggcccccgccacgccgacgtctacccccacgccgacgcctccggt
ttcccgccgtcgagtcccgaagaactcgacaggctgtacccgaaagtctggcctcgaaac
actttccgcggcggtgacggcgtcgtccgcatcgccggtgtcgacgtccgcgagctcgcc
gagaaatacggcacgccgctgttcgtcgtcgacgaggccgacttcaagtcccggtgcgcc
gactacgccgaggcgttcgacgacccggcgctcgtgcactacgcgtccaaggcgttcctg
tccatcgagatcgcccgctgggtggccgaacaggggctgagcctggacgtctgcagcggc
ggcgagctcgccgtcgcgcagcgcgcgaacttcccggccgagcggatcaccttccacggc
aacaacaagtcgttgcccgagctggaagccgccgtcgaagccggcgtcggcacggtcgtg
gtcgactcctatcacgagatcgcgcggctggccgacgtcgccgcccggaacgacgtcgtg
cagaacgtcctcatccgggtgaccgtcggcgtcgaggcgcacacccacgaattcatcgcg
accgcgcacgaggaccagaagttcggtttctcgctggcttccggtgacgcggccgaggcc
gtgcgccgcgtgctcaacgcgccgtcgctcaagctgatcggcctccacagccacatcggt
tcgcagatcttcgacgccgacggtttcgaggtcgccgcccgccgcgtggtcggcctgctg
gccgaactcgccaaggagcacggcaccgatctgctcgaccagctgtcgatcgtcgacctc
ggcggtggcttcggtatcgcctacaccgacaaggacaacccgcccccgcccgcgcagatg
atcacgcagatccgcgagatcgtccgcaaggaatgcgagtacgcgggccttccggtgccg
aagatcgccggcgagccgggccgcgccatcgccggccccggcacgatcacgctgtacgag
gtcggcaccatcaaggacgtctcgctcggcgacaaggccgcccgccgctacgtcagcgtc
gacggcggcatgagcgacaacatccgcaccgccctctacgacgcggtgtacgactgtcgt
ctcgtatcccggtcggccgacgacgacggggacggccaggcgagcgccgcgctgtcccgg
gtcgtgggaaagcactgtgagtccggcgacatcgtcgtccgtgactgctggctccccgac
acccttgctcccggcgacctgctcgccgtggcggccaccggggcgtactgctactcgatg
gccagcgggtacaaccggcagccgcggcccgcggtggtggccgtgcgcaacggcagcgcc
cgcgtgctgctgcggcgagagacgacggacgacatgctgcgcctggaggtctag
DBGET
integrated database retrieval system