Amycolatopsis coloradensis: LCL61_38225
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Entry
LCL61_38225 CDS
T10308
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
acor Amycolatopsis coloradensis
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acor03032
]
LCL61_38225
03400 DNA repair and recombination proteins [BR:
acor03400
]
LCL61_38225
Enzymes [BR:
acor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LCL61_38225
DNA replication proteins [BR:
acor03032
]
Prokaryotic type
DNA Topoisomerases
LCL61_38225
DNA repair and recombination proteins [BR:
acor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LCL61_38225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
WYW21394
LinkDB
All DBs
Position
8187877..8190363
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AA seq
828 aa
AA seq
DB search
MARRKGPTTKVDPSAFDRPGANVFDNSLKTEIEDSYLEYAYSVIHSRALPDARDGLKPVH
RRIMYSMNENGYRPTHAYVKSARVIGDVMGRYHPHGDTAIYDAMVRLAQDFSLNVPLVDG
HGNFGSPDDGPAASRYTEARLSPEAMLLVGELGEDTVDFRPNYDGSLEEPSVLPAAFPNL
LVNGTSGIAVGMATNMIPHNLTEVIGAARWLINHPNATLDKLMEFVPGPDLPTGGSLLGL
DEVRRAYETGRGVVRMRASAETGPLEGSRGRQAITVTELPYGVGPEKVIEKITDEVNKSK
RLTGIADVKDLTDRENGTRLVIECKVGVNPQALLADLYRLTPLEQSFGINNLVLVDGQPQ
TLGLKALLEVFLSHRYEVVTRRTRYRRRKREERLHLVDGLLIALLNIDKVIKLIRESENA
AAAKDGLMKRFKLSEIQATYILDTPLRRLTKYDRIELEAEQDKLREEIAELSKILDDESV
LKKVVSAELAKIAKDHPTERRTALIDGDLKEVLAASKPSGPLEVADDPCQVILSATGLVA
RTAAESEEASEVRRRNGRVKHDSVSAVVHSTARGQVLLVTNRGRAFKTDVLPLPVLPEQA
GTVSLRGGMAAKELVPLEKGERVIGLAPLGEQAAGSPGLALGTKHGVVKVCAPEWPVRSD
EFDVISLKDGDEVVGATWLTDGNETLAFLSSEASLLRYPASLVRPQGLKGGGMAGITVRG
EAEVVFFGAIRTDDAEHGEPMVVTATGASVKVTPFSEYPAKGRATGGVRAQRFLKGETRL
VVGWIGPRPAGASRTGDPVELPEVDVRRDGSGHAHPGPEVVGHLIERD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgtaagggccccaccacgaaggtcgacccgagcgcgttcgaccgccccggc
gcgaacgtcttcgacaactcgctgaagacggagatcgaggactcgtacctggagtacgcg
tactcggtcatccactcgcgggcgctcccggacgcgcgggacgggctgaagccggtgcac
cgccggatcatgtactcgatgaacgagaacggttaccggccgacccacgcgtacgtgaag
tcggcccgcgtgatcggcgacgtgatgggccggtaccacccgcacggcgacaccgcgatc
tacgacgccatggtgcggctcgcgcaggacttctcgctcaacgtcccactggtcgacggg
cacggcaacttcggctcccccgacgacggccctgccgcctcgcggtacaccgaggcgcgg
ctctcaccggaggcgatgctgctggtcggcgaactcggcgaggacaccgtcgacttccgg
ccgaactacgacggctcgctcgaagagccgtcggtgctgccggcggctttcccgaatctg
ctggtcaacggcacttccgggatcgcggtcggaatggcgaccaacatgatcccgcacaac
ctgaccgaggtcatcggcgcggcgcggtggctgatcaaccacccgaacgccaccctcgac
aagctgatggagttcgtcccgggccccgatctgccgaccggcggatcactgctgggactc
gacgaagtccgccgcgcgtacgagaccggccgtggtgtggtgcgcatgcgcgccagcgcc
gagaccggcccgttggagggcagccgcggccgccaggcgatcaccgtcaccgaactgccg
tacggcgtcggcccggagaaggtgatcgagaagatcaccgacgaggtcaacaagtccaag
cggctcaccggcatcgccgacgtcaaggacctcaccgaccgcgagaacggcacgcggctg
gtcatcgaatgcaaggtcggtgtgaacccgcaggcgctgctggcggatctgtaccggctg
acgccgctggagcagtcgttcggcatcaacaacctggtgctggtggacgggcagccgcag
acgctggggctcaaggcgctgctggaggtcttcctcagccaccgctacgaggtcgtcacc
cgccgcacgcggtaccggcgccgcaagcgcgaagagcgtctgcacctggtcgacggtctg
ctgatcgccctgctcaacatcgacaaggtgatcaagctgatccgcgagagcgagaacgcc
gcggccgcgaaggacggcctgatgaagcggttcaagctctcggagatccaggcgacctac
atcctggacaccccgctgcggcggctcacgaagtacgaccggatcgagctcgaagccgag
caggacaaactgcgcgaggagatcgccgaactgtcgaagatcctcgacgacgagtcggtg
ctgaagaaggtcgtgtcggccgagctggccaagatcgccaaggatcaccccaccgaacgc
cgcaccgcgctgatcgacggtgacctcaaggaggtcctcgccgcgtcgaaaccgtcgggg
cccctggaggtcgccgacgatccgtgccaggtgatcctgtcggccaccggactggtcgcg
cggacggcggcggaatcggaggaggcgtcggaagtgcggcgccgcaacggccgcgtcaaa
cacgactcggtgtccgcggtggtccattcgaccgcgcgcggtcaggtgctgctggtgacc
aaccgcggccgcgcgttcaagaccgacgtgctgccgctgccggtgctgcccgagcaggcg
ggcaccgtctccctgcgcggcgggatggccgcgaaggaactggtgccgctggaaaagggc
gagcgcgtcatcgggctggccccgctcggcgagcaggcggccggctccccagggctcgcg
ctcggcacgaagcacggtgtcgtgaaggtgtgcgcgccggagtggccggtccgctccgac
gagttcgacgtgatcagcctgaaggacggcgacgaggtcgtcggcgccacttggctcacc
gacggcaacgagacgctggcgttcctgtcgtccgaagcgtcattgctgcgctacccggct
tcgctcgtgcggccgcaaggtctcaagggcggcggcatggccgggatcaccgtgcgaggt
gaagcggaagtggtcttcttcggcgcgatccgcaccgacgacgccgaacacggcgagccg
atggtcgtcaccgcgaccggcgcgagcgtgaaggtgaccccgttcagcgagtacccggcc
aagggccgggcgaccggcggtgtccgggcgcagcggttcctcaagggcgagacgcggctg
gtcgtcggctggatcggcccgcgtcccgccggcgcctcgcgcaccggtgacccggtggag
ttgccggaggtcgacgtccggcgcgatggctccggccacgcacaccctggccccgaggtc
gtcggccacctgatcgaacgagactga
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