Amycolatopsis coloradensis: LCL61_39770
Help
Entry
LCL61_39770 CDS
T10308
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
acor Amycolatopsis coloradensis
Pathway
acor00521
Streptomycin biosynthesis
acor00523
Polyketide sugar unit biosynthesis
acor00525
Acarbose and validamycin biosynthesis
acor00541
Biosynthesis of various nucleotide sugars
acor01055
Biosynthesis of vancomycin group antibiotics
acor01100
Metabolic pathways
acor01110
Biosynthesis of secondary metabolites
acor01250
Biosynthesis of nucleotide sugars
Module
acor_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
acor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LCL61_39770 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCL61_39770 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LCL61_39770 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCL61_39770 (rfbB)
00525 Acarbose and validamycin biosynthesis
LCL61_39770 (rfbB)
Enzymes [BR:
acor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LCL61_39770 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WYW21691
LinkDB
All DBs
Position
complement(8520864..8521847)
Genome browser
AA seq
327 aa
AA seq
DB search
MRVLVTGGAGFIGSHYVRQVLTGAYPSMAGAELLVLDKLTYAGNEANLEPVRDNPRYRFE
KGDICDAALVGELMRGIDLVVHFAAESHVDRSIAGAADFVLTNVLGTQTLLQAALEAQVG
KFVHVSTDEVYGSIDNGSWDEDRALEPNSPYSASKASSDLLARSFFRTHGLPVCVTRCSN
NYGPYQFPEKVIPLFVTNLLDGKKVPLYGDGLNVRDWLHVDDHCNGIQLVADGGRPGEVY
NIGGGTELTNRELTERLLAAVGAGWDSVEPVEDRKGHDRRYSVDITKISRELGYAPRKSF
EDGLADTVAWYNENRSWWEPLKKRAGA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgctggtcaccggtggcgccgggttcatcggttcgcattacgtccggcaggtg
ctgacgggtgcatacccgagcatggccggcgccgagctgctcgtgctcgacaagctgacc
tacgcgggcaacgaagcgaacctggagcccgtacgcgacaacccgcgctaccggttcgaa
aagggcgacatctgtgacgccgccctggtcggtgagctgatgcggggtatcgacctggtc
gtgcacttcgccgccgagtcccatgtggatcgttcgatcgccggcgcggccgacttcgtg
ctgacgaacgtgctcggtacccagaccctgttgcaggccgcgctcgaggcgcaggtcggg
aagttcgtccacgtgtccaccgacgaggtctacggctcgatcgacaacggatcctgggac
gaggaccgcgcgctggagccgaattcgccgtactcggcgtcgaaggcgtcctcggatctg
ctggcccgttcgttcttccgtacgcacggattgcccgtctgtgtcacgaggtgctcgaac
aactacggtccgtaccaattccccgaaaaggtcatcccgctcttcgtgaccaacctgctc
gacggcaagaaggtcccgctctacggcgatgggctcaacgtgcgtgactggctgcacgtg
gacgatcactgcaacggcatccagctcgtcgccgacggcggcaggccgggcgaggtctac
aacatcggcggcggcaccgaactgaccaaccgcgagctgactgagcggctcctggccgcc
gtcggcgccggctgggacagcgtcgagccggtcgaggaccgcaagggacacgaccgccgg
tactccgtcgacatcaccaagatctcgcgggagctcggttacgcgccgcggaagtccttt
gaggacggtctggccgacactgtcgcctggtacaacgagaatcggtcttggtgggagccg
ctgaagaagcgtgcgggggcgtga
DBGET
integrated database retrieval system